Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L11
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z81071-6|CAB03010.1|  464|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U29488-1|AAA68773.2|  338|Caenorhabditis elegans Serpentine rece...    29   4.3  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    29   5.7  
AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical...    28   7.5  
AC006730-9|AAO91686.1|  330|Caenorhabditis elegans Serpentine re...    28   7.5  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    28   7.5  

>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 488 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 625
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z81071-6|CAB03010.1|  464|Caenorhabditis elegans Hypothetical
           protein F28F8.7 protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/71 (21%), Positives = 31/71 (43%)
 Frame = +1

Query: 193 RSFAS*SCLTISSSRPCLRTSRRSPRQYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGET 372
           R+F     + I   +  L+  ++ P    I+K+C    N+D +  F   ++  ++ +   
Sbjct: 223 RAFQPLRVVQIERFKDALKKMKKGPILREIQKNCMPNYNLDEIHHFCHAFQHHIMEKTSK 282

Query: 373 FVHTNELQMEE 405
             H NE   E+
Sbjct: 283 SCHCNEPLCED 293


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 468 RSPHENIEVLSVVEDSEDFD 409
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>U29488-1|AAA68773.2|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 31 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -3

Query: 347 ILYISMNCLTTSTFMYLSQLFSMLYCLGDLLDVLKHGRLEDMVKQLHDAKLLHL 186
           IL+ S  CL  S   Y + LFS L C+    D L     +      H +K+  L
Sbjct: 95  ILFQSSECLIESNLYYYTNLFSSLCCISLFFDRLLSLNAKTSYNTKHFSKIFLL 148


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 485 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLTAMSSVKPL**R*LKPPRT 655
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T  ++             T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTT--------STTTTT 308

Query: 656 RSSGNTTASRVTDDNLV 706
            ++  TT S  T D+L+
Sbjct: 309 PTTTTTTTSTTTSDDLL 325


>AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical
           protein Y73B3A.13 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/71 (21%), Positives = 30/71 (42%)
 Frame = +1

Query: 193 RSFAS*SCLTISSSRPCLRTSRRSPRQYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGET 372
           R+F       I   +  L+  ++ P    I+K+C    N+D +  F   ++  ++ +   
Sbjct: 202 RAFQPIRVAQIERFKDALKKMKKGPILREIQKNCMPNYNLDEIHHFCHAFQHHIMEKTSK 261

Query: 373 FVHTNELQMEE 405
             H NE   E+
Sbjct: 262 SCHCNEPLCED 272


>AC006730-9|AAO91686.1|  330|Caenorhabditis elegans Serpentine
           receptor, class i protein78 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = -3

Query: 359 GSMPILY-ISMN-CLTTSTFMYLSQLFSMLYC 270
           G +PI + +S++ CLT   F+Y+ Q+ SM+ C
Sbjct: 79  GFLPIKFGVSLHSCLTAVVFLYIYQVASMIVC 110


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 734 GGLPYASQSLPNCRQ*PVMP*YFQRTGSLAALVIF 630
           GG PY  +SL +CR     P +FQ T S AA V++
Sbjct: 332 GGTPYIYESLLDCRFRVSPPAFFQ-TNSQAAAVLY 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,376,710
Number of Sequences: 27780
Number of extensions: 332331
Number of successful extensions: 879
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)