Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L09
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0930 - 9173245-9173305,9173438-9173504,9173856-9174042           59   6e-09
03_06_0451 + 34025048-34027099,34028210-34028242                       29   3.9  
01_07_0150 + 41508546-41508636,41509384-41510343,41511082-415115...    29   6.8  

>08_01_0930 - 9173245-9173305,9173438-9173504,9173856-9174042
          Length = 104

 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 22/48 (45%), Positives = 35/48 (72%)
 Frame = +1

Query: 139 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 282
           WR AG+TYI YSN+ A ++RR LK+  ++EA  R++ H  ++ WA+G+
Sbjct: 11  WRAAGMTYIGYSNVCAALVRRCLKEPHKSEAASREKVHFAISKWADGK 58


>03_06_0451 + 34025048-34027099,34028210-34028242
          Length = 694

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 29/86 (33%), Positives = 46/86 (53%)
 Frame = +1

Query: 10  LPLTIGNP*DLIFFTLLSGCGNQENFNLFLRIKVNKNINKMSAWRQAGLTYINYSNIAAK 189
           +PLT   P  +I+ TLLS C  Q+NF++  RI   K + ++     A  +Y+  SNI A 
Sbjct: 503 MPLT---PDGVIWKTLLSACKTQKNFDMAERIA--KRVIELDPHDSA--SYVLLSNIRAT 555

Query: 190 VLRRSLKQEFRAEALKRDESHVRVTP 267
             R     E R +A++  +++VR  P
Sbjct: 556 SRRWGDVSEVR-KAMR--DNNVRKEP 578


>01_07_0150 +
           41508546-41508636,41509384-41510343,41511082-41511555,
           41511642-41511736
          Length = 539

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 360 LIVDDFHACWLTIPSSLWNSFLEVCRSSVGPRCDS 256
           ++VDD+  C+ T+ + L +S  E C  S    CD+
Sbjct: 157 IVVDDWTKCYGTVQTFLHSSDAESCSDSFKGECDA 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,757
Number of Sequences: 37544
Number of extensions: 272829
Number of successful extensions: 626
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)