Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L09
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   4.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.6  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 220 RAEALKRDESHVRVTPWANGRPAHLQKAVPK*RR 321
           R+   +R     R T W   RP    K +P+ RR
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 43  IFFTLLSGCGNQENFNLFLRIKVN 114
           I+F +L  CGN    N+FL I V+
Sbjct: 693 IYFIILFICGNYILLNVFLAIAVD 716


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +2

Query: 848 PXTPXAQPPGXXPFXPQTGP 907
           P  P AQPP   P  P  GP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGP 593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,519
Number of Sequences: 2352
Number of extensions: 10405
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)