Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L05
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 103 8e-21
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 73 9e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 69 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 64 6e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 42 0.026
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.035
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.43
UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 35 2.3
UniRef50_Q6ZDF0 Cluster: Epstein-Barr virus EBNA-1-like protein;... 35 3.0
UniRef50_A5P1E9 Cluster: Mandelate racemase/muconate lactonizing... 34 4.0
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 103 bits (246), Expect = 8e-21
Identities = 57/92 (61%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
Frame = +2
Query: 557 TSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRXCRLXDTCPPFSPSGSVALSHXS 736
TSITKIDAQVRGGETRQDYKDTRR PLEAPSCALLFR CRL DTCPPFS L
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFS------LREAW 77
Query: 737 RWXVSQFGVGRSLQ------AGAVCPKPPVXP 814
R+ ++ VG S++ + AVC PP P
Sbjct: 78 RFLIAH-AVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 41.5 bits (93), Expect = 0.026
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 681 RIPVRLSP--LREAWRFLIXHAGXYLSSV*VVRSKLGLCAPNPPFXPXAXPYP 833
R+P P LREAWRFLI HA +C NPPF P A PYP
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCT-NPPFSPTAAPYP 114
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 72.9 bits (171), Expect = 9e-12
Identities = 42/89 (47%), Positives = 52/89 (58%)
Frame = -3
Query: 849 KDDSYRDXXQRSG*TGGLGHTAPAWSERPTPN*DTYQREX*ESATLPEGEKGGQVSXKRQ 670
+DDSYR + S G+ +PAWSERP P+ DT ++ P+G+K QVS KRQ
Sbjct: 12 QDDSYRKG-RSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQ 70
Query: 669 XRNRRAHEGASRGKRLVSL*SCRVSPPLT 583
RNRRAHEGA+ K SL PPLT
Sbjct: 71 GRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 557 TSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLF 664
TSITK DAQ+ GGETRQDYKDTRR PL APSCALLF
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 498 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 385
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 557 TSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLF 664
TSI K DAQ+ GGETRQDYKD RR PL APSCALLF
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127
Score = 56.4 bits (130), Expect = 9e-07
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +1
Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 501
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 502 GTVKRPRCWRFSIXSAPLNEHHKN 573
RPR RFSI SAPL K+
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKS 97
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 465
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 100 DPDMIRYIDEFGQTTTRMQ 156
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 417 HSKAVIRLSTESGDNAGKNM 476
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.5 bits (93), Expect = 0.026
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 612 IKIPGVXPWKLPRALSCSXPAAXRIPVRLSPLREAWRFLIXHAGXY-LSSV*VVRSKLGL 788
+KI V LP ALSCS PA RIPV P A + H+ +S+ +
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWA 89
Query: 789 CAPNPPFXPXAXPYP 833
+ NPPF P A PYP
Sbjct: 90 VSKNPPFSPTAAPYP 104
Score = 37.1 bits (82), Expect = 0.57
Identities = 28/77 (36%), Positives = 31/77 (40%)
Frame = +2
Query: 584 VRGGETRQDYKDTRRXPLEAPSCALLFRXCRLXDTCPPFSPSGSVALSHXSRWXVSQFGV 763
VR GETRQD K P PPFS +GSVALSH S +S
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISA-RC 81
Query: 764 GRSLQAGAVCPKPPVXP 814
+ AV PP P
Sbjct: 82 RSFAPSWAVSKNPPFSP 98
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.035
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 224 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 346
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 37.5 bits (83), Expect = 0.43
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 521 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLF 664
++ +F T+ITKI Q + +T+ +YK T PL++PS +LLF
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLF 112
>UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 105
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2
Query: 721 RHASRRGERRTGIR*AAGSEQESARGSFQGXTPGIFIVLSG 599
R A RGERR+ AAGS + ARG+ +G PG+ L G
Sbjct: 9 RRAGERGERRSAAASAAGSGRRGARGA-RGEAPGLAARLKG 48
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -3
Query: 849 KDDSYRDXXQRSG*TG-GLGHTAPAWSERPTPN 754
+DDSYR +RSG G+ +PAWSERPTPN
Sbjct: 12 QDDSYR--IRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_Q6ZDF0 Cluster: Epstein-Barr virus EBNA-1-like protein;
n=1; Oryza sativa (japonica cultivar-group)|Rep:
Epstein-Barr virus EBNA-1-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 502
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -2
Query: 820 AXGXNGGFGAHSPSLERTTYTELRYXPA*XMRKRHASRRGERRTGIR*AAGSEQESARGS 641
A G GG GAH+ E R + + H RGERRTG+ + RGS
Sbjct: 73 AIGFGGGHGAHARLAEDADAAGPRAASRLAVDRAHEQSRGERRTGVSLTRSRPRWRLRGS 132
Query: 640 FQG 632
G
Sbjct: 133 HAG 135
>UniRef50_A5P1E9 Cluster: Mandelate racemase/muconate lactonizing
enzyme, C-terminal domain protein; n=1; Methylobacterium
sp. 4-46|Rep: Mandelate racemase/muconate lactonizing
enzyme, C-terminal domain protein - Methylobacterium sp.
4-46
Length = 296
Score = 34.3 bits (75), Expect = 4.0
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -2
Query: 727 RKRHASRRGERRTGIR*AAGSEQESARGSFQGXTPGIFIVLSGFATSDLSVDFC 566
R RH SRRG G+R A + R + G P I + LSG T D ++ FC
Sbjct: 77 RLRHPSRRGTTDDGLRRRAVAAVAGLRAAL-GPGPKIMLDLSGGLTPDETIRFC 129
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 507 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 385
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 258 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 94
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,104,034
Number of Sequences: 1657284
Number of extensions: 14858171
Number of successful extensions: 36066
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 34647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36050
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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