Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L04
(859 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 130 3e-29
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 8e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 50 1e-04
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 48 2e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.080
UniRef50_Q6ZDF0 Cluster: Epstein-Barr virus EBNA-1-like protein;... 38 0.32
UniRef50_UPI0001555B8B Cluster: PREDICTED: similar to Poly [ADP-... 36 0.99
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.7
UniRef50_Q84TS0 Cluster: Putative uncharacterized protein OSJNBb... 36 1.7
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 35 2.3
UniRef50_Q6MMS6 Cluster: Translation initiation factor IF-2; n=1... 35 2.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q7TPM1 Cluster: Uncharacterized protein KIAA0515; n=8; ... 34 5.3
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.0
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.0
UniRef50_Q9VA38 Cluster: CG12072-PA; n=5; Sophophora|Rep: CG1207... 33 7.0
UniRef50_Q7SHC6 Cluster: Predicted protein; n=1; Neurospora cras... 33 7.0
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 130 bits (315), Expect = 3e-29
Identities = 73/109 (66%), Positives = 77/109 (70%), Gaps = 6/109 (5%)
Frame = +2
Query: 482 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFPT 661
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF-R 60
Query: 662 PAAYRIPCPPFSLREAWR--LSH----SSRCRYLSSGVXRSLPSWAVCT 790
P CPPFSLREAWR ++H S RCR + PSWAVCT
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFA-------PSWAVCT 102
Score = 40.3 bits (90), Expect = 0.061
Identities = 28/64 (43%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 624 PWKLPRALSCFRPLPLTGYPVRLSPFGKRGA--FLIAHAVGISVPVXVVRSQAGLCAPNP 797
P + P FRP L P PF R A FLIAHAVGISV +C NP
Sbjct: 49 PLEAPSCALLFRPCRL---PDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCT-NP 104
Query: 798 PFNP 809
PF+P
Sbjct: 105 PFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.1 bits (221), Expect = 8e-18
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +2
Query: 500 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 655
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = +2
Query: 506 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 655
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 313 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 411
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -2
Query: 555 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 376
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 289 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 447
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +2
Query: 449 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 628
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 629 EAPSCALLFP 658
++PS +LLFP
Sbjct: 104 QSPSYSLLFP 113
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 49.6 bits (113), Expect = 1e-04
Identities = 33/70 (47%), Positives = 36/70 (51%)
Frame = +2
Query: 575 VRGGETRQDYKDTRRFPLEAPSCALLFPTPAAYRIPCPPFSLREAWRLSHSSRCRYLSSG 754
VR GETRQD K P AL PA RIP PPFSL + LSHSS +S+
Sbjct: 23 VRSGETRQDLKIITVSDESLP-LALSCSNPAVSRIPVPPFSLAGSVALSHSSHSG-ISAR 80
Query: 755 VXRSLPSWAV 784
PSWAV
Sbjct: 81 CRSFAPSWAV 90
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = -3
Query: 824 KGAAVGVERGVWCTQPSLGANDXHRN*DTYSVSYEKGATLPEGRKADRVSGKRQG 660
KG + ERGV P+ DT SVSYEK P+G+KA++VSGKRQG
Sbjct: 18 KGRSSRAERGVRAYSPAWSERPKPSR-DTSSVSYEKAPRFPKGKKAEQVSGKRQG 71
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 796 GFGAHSPAWERTTYTGTEIPTA*AMRKAPRFPKGERRTGYPVSGRGRKQESARGSFQGET 617
G A+SPAW + + + KAPRFPKG++ +GR + + G+ ++
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSV-SYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKS 85
Query: 616 P 614
P
Sbjct: 86 P 86
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 92 DPDMIRYIDEFGQTTTRMQ 148
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 287 SALMNRPTRGERRFAYW 337
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.080
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 359 ERGSGRAPNTQTASPRALADSLMQ 288
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q6ZDF0 Cluster: Epstein-Barr virus EBNA-1-like protein;
n=1; Oryza sativa (japonica cultivar-group)|Rep:
Epstein-Barr virus EBNA-1-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 502
Score = 37.9 bits (84), Expect = 0.32
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = -1
Query: 829 GIRAQRLGLNGGFGAHSPAWERTTYTGTEIPTA*AMRKAPRFPKGERRTGYPVSGRGRKQ 650
G + +G GG GAH+ E G + A+ +A +GERRTG ++ R R +
Sbjct: 68 GASSAAIGFGGGHGAHARLAEDADAAGPRAASRLAVDRAHEQSRGERRTGVSLT-RSRPR 126
Query: 649 ESARGSFQG 623
RGS G
Sbjct: 127 WRLRGSHAG 135
>UniRef50_UPI0001555B8B Cluster: PREDICTED: similar to Poly
[ADP-ribose] polymerase 14 (PARP-14) (B aggressive
lymphoma protein 2), partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Poly [ADP-ribose]
polymerase 14 (PARP-14) (B aggressive lymphoma protein
2), partial - Ornithorhynchus anatinus
Length = 609
Score = 36.3 bits (80), Expect = 0.99
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 796 GFGAHSPAWERTTYTGTEIPTA*AMRKAPRFPKGERRTGY-PVSGRGRKQESARGSFQGE 620
G GA +PA ++ G + R+ PR GERR G+ P G + G QG+
Sbjct: 429 GDGAGAPAAHLSSVPGDRVDAGDRQRRGPRSAAGERRPGFRPAPGGRPRAAGPAGKLQGQ 488
Query: 619 TPG 611
G
Sbjct: 489 REG 491
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -2
Query: 582 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 412
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 411 SELIPL 394
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q84TS0 Cluster: Putative uncharacterized protein
OSJNBb0097F01.16; n=3; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0097F01.16 - Oryza sativa subsp. japonica (Rice)
Length = 360
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 699 REKGGQGIR*AAGVGNRRAHEGASRGKRLVSL*SCRVSPPLT 574
R +GG R A V RR E A+ G+RL L SPPL+
Sbjct: 142 RRRGGAAARGGAAVAGRRGEEAAAAGRRLYLLPPSSFSPPLS 183
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 667 GRGRKQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 488
G G KQ S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 580 GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>UniRef50_Q6MMS6 Cluster: Translation initiation factor IF-2; n=1;
Bdellovibrio bacteriovorus|Rep: Translation initiation
factor IF-2 - Bdellovibrio bacteriovorus
Length = 975
Score = 35.1 bits (77), Expect = 2.3
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 718 KAPRFPKGERRTGYPVSGRGRKQESARGSFQGETPGIFIVLSGFA-TSDLSVDFCDARQG 542
+AP+ P+GER G G +Q A SF G+ PG F +G A T ++ F A Q
Sbjct: 241 QAPQRPQGERPAGGFTPRAGGEQRGASASFTGQRPGGFNRPAGGAPTRNIRTGFVAANQP 300
Query: 541 GGAYGKTPATR 509
+T A R
Sbjct: 301 PEPIVETGADR 311
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 170 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 337
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 622 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 443
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 442 DSVD 431
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q7TPM1 Cluster: Uncharacterized protein KIAA0515; n=8;
Theria|Rep: Uncharacterized protein KIAA0515 - Mus
musculus (Mouse)
Length = 1486
Score = 33.9 bits (74), Expect = 5.3
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 826 IRAQRLGLNGGFGAHSP-AWERTTYTGTEIPTA*AMRKAPRFPKGERRTGYPVSGRGRKQ 650
+R+ L GG G+HSP A ERTT+ ++ P + P K ER P R +Q
Sbjct: 791 VRSPDEALPGGLGSHSPYALERTTHASSDGP------ETPS-KKSEREVSLPTQ-RASEQ 842
Query: 649 ESARGSF 629
E AR F
Sbjct: 843 EEARKQF 849
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 416 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 595
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 596 QDYKDT 613
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 422 NTVIHRIRGITQERTCE 472
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q9VA38 Cluster: CG12072-PA; n=5; Sophophora|Rep:
CG12072-PA - Drosophila melanogaster (Fruit fly)
Length = 1105
Score = 33.5 bits (73), Expect = 7.0
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +1
Query: 544 PDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVSDPCRLPDTLSAFLPSGSVAPFS 723
P HH ++ SS+ NP G + P G S V +P + P R P SA P V P S
Sbjct: 161 PHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEV-APPAPPPRNPTACSAATPPPPVPPTS 219
>UniRef50_Q7SHC6 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 480
Score = 33.5 bits (73), Expect = 7.0
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Frame = +2
Query: 464 TCEQKASKRPGTVKRPRCWRFS--IGSAPLTSITKIDAQVRGGETR--QDYKDTRRFPLE 631
+C ++ T R R R S S ++ ++ GG + + Y TRR +
Sbjct: 133 SCSDFSTVASKTATRARTSRHSQPASSISISEVSSESGATGGGPSPNLKKYLRTRRGAIS 192
Query: 632 APSCALLFPTPAAYRI----PCPPFSLREAWRLSHSSRCRYLSSGVXRSL 769
PSC P P+ + P P S R +WR S S R + G R L
Sbjct: 193 GPSCPGPAPGPSPLSLALSPPSPALSSRSSWRSSSSRPSRSRAYGGERLL 242
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -2
Query: 555 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 385
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,939,116
Number of Sequences: 1657284
Number of extensions: 17746898
Number of successful extensions: 52645
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 49628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52570
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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