Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L04
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 3.2
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 3.2
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.4
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 28 7.4
AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 525 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 421
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 525 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 421
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 525 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 421
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 809 GVERGVWCTQPSLGANDXHRN*DTYSVSYEKGA-TLPEGRKADRVSGKRQGSETGERTRE 633
G+ER VWC Q GAN T ++ Y++G+ TL GR+ VS G + E
Sbjct: 270 GLER-VWCIQAQKGAN-------TIAIGYDEGSVTLKLGREEPAVSMDSSGKILWAKHSE 321
Query: 632 LPGGN 618
+ N
Sbjct: 322 IQQAN 326
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 622 PPGSSLVRSPVSDPCRLPDTLS--AFLPSGSVAPFS*LTL*VSQFRCXSFAPKLGCVHQT 795
P S+L+RSP S L+ +PS S APF TL V S+ LG Q
Sbjct: 238 PDFSALLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTTLLVPPKTVSSYHSPLGASSQP 297
Query: 796 PRSTPTAA 819
P + + A
Sbjct: 298 PSTQKSPA 305
>Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical
protein C07G2.2b protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 622 PPGSSLVRSPVSDPCRLPDTLS--AFLPSGSVAPFS*LTL*VSQFRCXSFAPKLGCVHQT 795
P S+L+RSP S L+ +PS S APF TL V S+ LG Q
Sbjct: 189 PDFSALLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTTLLVPPKTVSSYHSPLGASSQP 248
Query: 796 PRSTPTAA 819
P + + A
Sbjct: 249 PSTQKSPA 256
>Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical
protein C07G2.2a protein.
Length = 457
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 622 PPGSSLVRSPVSDPCRLPDTLS--AFLPSGSVAPFS*LTL*VSQFRCXSFAPKLGCVHQT 795
P S+L+RSP S L+ +PS S APF TL V S+ LG Q
Sbjct: 189 PDFSALLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTTLLVPPKTVSSYHSPLGASSQP 248
Query: 796 PRSTPTAA 819
P + + A
Sbjct: 249 PSTQKSPA 256
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 590 TRQD---YKDTRRFPLEAPSCALLFPTPAAYRIPCPPFSLREAWRLSHSSRCRYLSS 751
T QD Y D+ P +AP L PT + PP+ R WR ++ +LSS
Sbjct: 470 TNQDHPWYFDSDDHPNDAP---LFCPTNGSSPWEMPPYKTRAVWRFGDANSGAFLSS 523
>AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical
protein Y24D9A.5 protein.
Length = 282
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 416 GGNTVIHRIRGITQERTCEQKASKRPGTVK 505
GG +V +R + Q+++ ++SKRPG ++
Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPGILQ 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,646,113
Number of Sequences: 27780
Number of extensions: 399010
Number of successful extensions: 1063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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