Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L04
(859 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu... 31 1.3
At4g00740.1 68417.m00101 dehydration-responsive protein-related ... 31 1.3
At1g24140.1 68414.m03045 matrixin family protein similar to matr... 30 1.7
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb... 29 4.0
At1g68170.1 68414.m07787 nodulin MtN21 family protein similar to... 29 4.0
At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.2
At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.2
At3g55480.2 68416.m06162 adaptin family protein similar to AP-3 ... 29 5.2
At3g55480.1 68416.m06161 adaptin family protein similar to AP-3 ... 29 5.2
At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 6.9
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 24 9.0
At5g20380.1 68418.m02424 transporter-related low similarity to v... 28 9.1
>At4g35785.2 68417.m05083 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 141
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -1
Query: 721 RKAPRFPKGERRTGYPVS---GRGRKQESARGSFQGETPGIFIVLSGFAT--SDLSVDFC 557
R PR R PVS RGR + +RG + E PG + ++G +T +D ++
Sbjct: 32 RSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLSTRVTDKDLEAH 91
Query: 556 DARQG 542
A++G
Sbjct: 92 FAKEG 96
>At4g00740.1 68417.m00101 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 600
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 623 PLEAPSCALLFPTPAAYRIPCP-PFSLREAW 712
P E P C L P P+ Y+IP P P SL + W
Sbjct: 118 PEETPLC--LIPPPSGYKIPVPWPESLHKIW 146
>At1g24140.1 68414.m03045 matrixin family protein similar to matrix
metalloproteinase [Cucumis sativus] GI:7159629; contains
InterPro accession IPR001818: Matrixin
Length = 384
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Frame = -1
Query: 712 PRFPKGERRTGYPVSGRGRKQESARGSF-------QGETPGIFIVLSGFATSDLSVDFCD 554
PR+P+ R Y R E + F + TP F + F+TSD+S+ F
Sbjct: 166 PRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGFYS 225
Query: 553 ARQGGG 536
G G
Sbjct: 226 GEHGDG 231
>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
(RbohA) / NADPH oxidase identical to respiratory burst
oxidase protein A from Arabidopsis thaliana [gi:3242781]
Length = 902
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 538 RPPDEHHKNRRSSQRW 585
RPPDEH NR S+ W
Sbjct: 667 RPPDEHRLNRADSKHW 682
>At1g68170.1 68414.m07787 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 356
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = -2
Query: 525 KRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAA 388
+R++R FT +LLA S +L VIP IL IT L S AA
Sbjct: 54 QRKKRPEFTCRLMLLALLSGLLGVVIPSILTITGLALTSATFTSAA 99
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 346 PLPRSLTRCARSFGCGERYQLTQRR 420
P PRS RCA S GC R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 346 PLPRSLTRCARSFGCGERYQLTQRR 420
P PRS RCA S GC R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221
>At3g55480.2 68416.m06162 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203; contains
Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 492 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 394
GL L F S +LS IPL++ ITV +E++ L
Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956
>At3g55480.1 68416.m06161 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203; contains
Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 492 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 394
GL L F S +LS IPL++ ITV +E++ L
Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956
>At3g20830.1 68416.m02634 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 408
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 337 PIRKPPLPARWPIH*CRKNLPHL 269
P PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 793 TPRSTPTAAPLS 828
TP +TPTAAP+S
Sbjct: 56 TPSATPTAAPVS 67
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 625 PGSSLVRSPVSDPCRLPDTLSAFLPSGSVAP 717
PG + RSP+ P + P T + P+ S+ P
Sbjct: 24 PGPAPTRSPLPSPAQPPRTAA---PTPSITP 51
>At5g20380.1 68418.m02424 transporter-related low similarity to
vesicular glutamate transporter 3 [Rattus norvegicus]
GI:21685382
Length = 517
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 510 GLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAER 379
G +T L + S LS + W+++LPPL+ ++ + A +
Sbjct: 332 GHYTCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQ 375
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,884,997
Number of Sequences: 28952
Number of extensions: 380966
Number of successful extensions: 1039
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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