Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K24
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 819 PPPPPPP 839
           PPPPPPP
Sbjct: 731 PPPPPPP 737



 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 821 PPPPPPP 841
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 818 PPPPPPPPXXXKXRPPPPXP 877
           P P P P    + +P PP P
Sbjct: 251 PTPKPRPTKVSRRKPRPPRP 270


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 861 GRXXXXXGGGGGGGGXXXXXEGGG 790
           G      GGG GGG      +GGG
Sbjct: 85  GENNDDSGGGRGGGRDGDRGDGGG 108



 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 834 GGGGGGXXXXXEGGGGG 784
           GGG GG      G GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 838 GGGGGGGXXXXXXGGGG 788
           GGG GGG       GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 867 GGGRXXXXXGGGGGGGG 817
           GGGR     G  G GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 749 PPXXGXPXPPXXPPPPP 799
           PP      P   PPPPP
Sbjct: 202 PPTEDCDVPSTIPPPPP 218


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 105 GVFTXPKNCDDY 70
           G+F+ PKNC  Y
Sbjct: 564 GIFSDPKNCAAY 575


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 801 EGGGGGXXGGXGXPXXG 751
           +GGGGG   G   P  G
Sbjct: 523 KGGGGGSGSGNNQPPGG 539


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,993
Number of Sequences: 336
Number of extensions: 4918
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)