Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K23
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 34 0.11
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 34 0.15
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 31 1.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 1.4
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 1.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 1.9
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 1.9
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 1.9
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 1.9
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 30 1.9
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 30 2.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.3
U70853-8|AAB09145.3| 191|Caenorhabditis elegans Hypothetical pr... 29 4.3
U70853-7|ABQ13066.1| 228|Caenorhabditis elegans Hypothetical pr... 29 4.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.3
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 4.3
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.7
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 29 5.7
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 5.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.7
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 5.7
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 29 5.7
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 28 7.5
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 28 10.0
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 28 10.0
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 28 10.0
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 10.0
AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical ... 28 10.0
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Frame = +3
Query: 180 IQLRHHPWKATSSSTTRP-------------ATEFTPRLKVPSRTSTQNTPPSKLRVPTS 320
+ ++HHP + S T+P P PS++ Q+ PPS+ ++P +
Sbjct: 538 VPMQHHPQQHPSQHQTQPNQQQQQHPSGYGIGVSTAPASMEPSQSVDQSAPPSQAQIPAT 597
Query: 321 TLPLDGQPIDLAY-----VADENGYQ-PQGSPSAHPSPN 419
+ P AY +GYQ P +P A PSP+
Sbjct: 598 STPSTSSQQQNAYPEFPDFPSSSGYQEPTVAPEAIPSPS 636
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 174 GQIQLRHHPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDL 353
G + +R T++ST A + P +T N +K + D Q D
Sbjct: 181 GGVPIRFLGPNTTAASTAESAFNAKSGSQKPQPPTTANGSSTKYNKISDDEGFDSQDRDR 240
Query: 354 AYVADENGYQPQGSPS 401
Y +E G+ P GSPS
Sbjct: 241 NYSTEEGGWSPNGSPS 256
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTL---PLDGQPIDLAYVAD 368
P ST P T P + P T PP+ R P +T P P+ D
Sbjct: 293 PQPPPRGSTAAPGTRAPPATRAPPAT---RAPPATTRAPPATTRPAPASQPPVREPETPD 349
Query: 369 ENGYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSP 503
P AHPSP+ S + + P+ PS+ S P
Sbjct: 350 SGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPS-PSYPSPSYP 393
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 207 ATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLP 329
AT ++TT+P T VP +T T P K PT+ P
Sbjct: 348 ATEAATTKPTTTTVTTTTVPPKTDPPRTEPPKTEPPTTEPP 388
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRV---PTSTLPLDGQPIDLAY 359
P TS+ +TRP T R + P T+NTPP V P+ST+P P Y
Sbjct: 681 PTPTTSARSTRPTASVTRRPEFP----TRNTPPFGGNVPNGPSSTVPPASNPTTEGY 733
Score = 28.3 bits (60), Expect = 7.5
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Frame = +3
Query: 204 KATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKL---RVPTSTLPLDGQPIDLAYVADEN 374
+A + TRP P + P R P K+ +VP L G A+V
Sbjct: 50 RAQPNYYTRPEQVSIPEYR-PPRQRLPPLPSPKISYQQVPPHQLTSGGSFRPFAWV---- 104
Query: 375 GYQPQ-GSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKE 491
G QP+ GSP NS P + PP PP+W++
Sbjct: 105 GPQPKPGSPQTSYYENS----PNKGQFPKGLPPLPPNWQQ 140
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 243 FTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQ-PIDLAYVADENGYQPQGSPSAHP-SP 416
++P S TS +P S PTS P GQ P+ +Y Y P SPS P SP
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTS--PAAGQSPVSPSYSPTSPSYSPT-SPSYSPTSP 1631
Query: 417 NSRGDRPRSCLHSRATPPAPPSWKEKSSPT 506
+ P S + P PS+ SSP+
Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPSY-SPSSPS 1660
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 243 FTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQ-PIDLAYVADENGYQPQGSPSAHP-SP 416
++P S TS +P S PTS P GQ P+ +Y Y P SPS P SP
Sbjct: 1582 YSPSSPQFSMTSPHYSPTSPSYSPTS--PAAGQSPVSPSYSPTSPSYSPT-SPSYSPTSP 1638
Query: 417 NSRGDRPRSCLHSRATPPAPPSWKEKSSPT 506
+ P S + P PS+ SSP+
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPSY-SPSSPS 1667
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
T++STT T TP + T+T TP + PT+T
Sbjct: 68 TTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTT 105
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST----LPLDGQPIDLAYVADENG 377
T+++TT T TP + T+T TP + PT+T P V
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 378 YQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATSTNET 557
P + + +P + P + TP S ++PT ++ + T T+T T
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPT----TTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPT 277
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 198 PWKATSSSTTRPA-TEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
P T+ +TT P T TP + T+T TP + PT+T
Sbjct: 143 PTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 185
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
T+++TT T TP + T+T TP + PT+T
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 192
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
T+ +TT T TP + T+T TP + PT+T
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +1
Query: 313 LQVHFPWTDNPSTSPTSLTRTVTNPREAHLPTPHPIPEAIARALAYIRGPPPQPLRRGKK 492
L V T PS P+S TR + P P P PIPE + LA P P R +K
Sbjct: 34 LNVALTATPPPSVEPSSPTRP-SEPIPP--PLPEPIPELVQILLAAEPNKPSVPKRSNRK 90
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPS------RTST------QNTPPSKLRVPTSTLPLDG 338
H W S TT+ A+ R++ PS RTST + PPS +R P +
Sbjct: 31 HSWSVLVSMTTKHASTTNTRMERPSTASSRPRTSTGRAPSARARPPSAMRAPPPQPTYEN 90
Query: 339 QPIDLAYVADENGYQPQGSPSAHPSPNSR-GDRPRSCLHSRA-TPPAPPS 482
+P + + P P P SR G P SRA PP P+
Sbjct: 91 RPTTGMSMRNGGPPVPPSRSGMIPVPPSRSGGPPAPMPVSRAGGPPRAPT 140
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = +1
Query: 334 TDNPSTSPTSLTRTVTNPREAHLPTPHPIPEAIARALAYIRGPPPQPLRRGKKSRRQLVR 513
T + ST+ T + R T T P A AR + +R PPPQP R
Sbjct: 41 TKHASTTNTRMERPSTASSRPRTSTGRA-PSARARPPSAMRAPPPQP----TYENRPTTG 95
Query: 514 ISQDNNIPPL 543
+S N PP+
Sbjct: 96 MSMRNGGPPV 105
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/125 (23%), Positives = 52/125 (41%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENG 377
P T S+ T PA + TP K P T TP + R P + ++ +P VA+E
Sbjct: 453 PATPTESNLTTPAPK-TP--KTPKTPRTPRTPKTP-RTPKTPAVVEPEP---EPVAEEPE 505
Query: 378 YQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATSTNET 557
+ P P + + + A P P + + + PT +++ + S +T
Sbjct: 506 PVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTA-EEAEPEAVEESIEKT 564
Query: 558 DIMXE 572
+++ E
Sbjct: 565 EVVEE 569
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/125 (23%), Positives = 52/125 (41%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENG 377
P T S+ T PA + TP K P T TP + R P + ++ +P VA+E
Sbjct: 403 PATPTESNLTTPAPK-TP--KTPKTPRTPRTPKTP-RTPKTPAVVEPEP---EPVAEEPE 455
Query: 378 YQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATSTNET 557
+ P P + + + A P P + + + PT +++ + S +T
Sbjct: 456 PVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTA-EEAEPEAVEESIEKT 514
Query: 558 DIMXE 572
+++ E
Sbjct: 515 EVVEE 519
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/125 (23%), Positives = 52/125 (41%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENG 377
P T S+ T PA + TP K P T TP + R P + ++ +P VA+E
Sbjct: 453 PATPTESNLTTPAPK-TP--KTPKTPRTPRTPKTP-RTPKTPAVVEPEP---EPVAEEPE 505
Query: 378 YQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATSTNET 557
+ P P + + + A P P + + + PT +++ + S +T
Sbjct: 506 PVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTA-EEAEPEAVEESIEKT 564
Query: 558 DIMXE 572
+++ E
Sbjct: 565 EVVEE 569
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/125 (23%), Positives = 52/125 (41%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENG 377
P T S+ T PA + TP K P T TP + R P + ++ +P VA+E
Sbjct: 453 PATPTESNLTTPAPK-TP--KTPKTPRTPRTPKTP-RTPKTPAVVEPEP---EPVAEEPE 505
Query: 378 YQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATSTNET 557
+ P P + + + A P P + + + PT +++ + S +T
Sbjct: 506 PVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTA-EEAEPEAVEESIEKT 564
Query: 558 DIMXE 572
+++ E
Sbjct: 565 EVVEE 569
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 1/137 (0%)
Frame = +3
Query: 174 GQIQLRHHPWKATSSSTTRPATEFT-PRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPID 350
G + H + S+S T P + + TST T P+K PTS +P
Sbjct: 218 GCFEDNHKDCSSGSTSPTCPKNATAVASVTTTASTSTTKTSPTKPPTPTS------RPTS 271
Query: 351 LAYVADENGYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQ 530
+ + +P + +++ R H + PP PP E + P D ++
Sbjct: 272 APTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPPPPIHE-AQPEVSDSNKLG 330
Query: 531 HTATSTNETDIMXEINC 581
TA S + + E NC
Sbjct: 331 TTAASRKDCEQSDE-NC 346
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
P T+++TT T TP + T+T TP + PT+T
Sbjct: 85 PSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 126
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPI 347
T+++TT T TP + T+T TP + PT+T P+
Sbjct: 96 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPL 141
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 198 PWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLP 329
P TSS+T P T+ T P T+T+ TPP+ P + P
Sbjct: 382 PTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPPITPPP 425
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.3
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Frame = +3
Query: 213 SSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRV----------PTSTLPLDGQPIDLAYV 362
+S +P+ E +P PS + + PPS V P S P+D V
Sbjct: 78 TSVVPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSV 137
Query: 363 ADENGYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPS 482
+QP G PS P S +P P PPS
Sbjct: 138 EPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPS 177
>U70853-8|AAB09145.3| 191|Caenorhabditis elegans Hypothetical
protein M01H9.4a protein.
Length = 191
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 337 DNPSTSPTSLTRTVTNPREAHLPT 408
+ PSTSPT++ R ++P H+P+
Sbjct: 106 EEPSTSPTTMPRQQSDPHTYHMPS 129
>U70853-7|ABQ13066.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.4b protein.
Length = 228
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 337 DNPSTSPTSLTRTVTNPREAHLPT 408
+ PSTSPT++ R ++P H+P+
Sbjct: 143 EEPSTSPTTMPRQQSDPHTYHMPS 166
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 231 PATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLP 329
P EF+ R + PSR ST+++ ++ VP + P
Sbjct: 56 PTHEFSDRRRQPSRVSTEDSEQDQVFVPRAVAP 88
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/106 (26%), Positives = 42/106 (39%)
Frame = +3
Query: 174 GQIQLRHHPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDL 353
G I + HP+K T + T F PS TST P +P + L +P+DL
Sbjct: 344 GNISVFRHPFKENDEDTFQVDTSFE-----PSATST----PKFTGIPRTGL---RRPLDL 391
Query: 354 AYVADENGYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKE 491
N + +G+P+ P R +R + H W+E
Sbjct: 392 GEAGSSNEHN-RGAPTPKRKPVFRKERKKR-THEEIQEELRKIWEE 435
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +1
Query: 340 NPSTSPTSLTRTVTNPREAHLPTPH-PIPEAIARALAY---IRGPPPQPLRRGKKSRRQL 507
NPS VT P +P P P+ A A A AY + PPP+P +++ +
Sbjct: 161 NPSPYYQPRPNYVTQPPAPIIPPPQPPVMTASAAAAAYRDRLPPPPPKPPMPDLRTKEPI 220
Query: 508 -VRISQDNNIPP 540
+R + IPP
Sbjct: 221 GIRSWNGSGIPP 232
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 340 NPSTSPTSLTRTVTNPREAHLPTPHPIPEAIARALAYIRGPPPQP 474
+P T P + P++ PTP P PE+ A A ++ P P P
Sbjct: 46 SPKTVPVTEQPAAAPPQQLEQPTPAPAPES---APAPVQCPEPTP 87
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADEN 374
H ++++SS + P + P R ST + P +PT+ P++ P +
Sbjct: 254 HDFQSSSSPSEEPLDMSQKSMPAP-RVSTASPDPPSFVLPTARSPINTSPSSSPKASSPK 312
Query: 375 GYQPQ-GSPSAHP-SPNSRGDRPR 440
P+ SP + P SP + P+
Sbjct: 313 ASSPKAASPVSSPKSPVIQDQSPK 336
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 198 PWKATSSSTT-RPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
P +TSS+TT +P+T T P+ T+T T K TST
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTST 627
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 198 PWKATSSSTT-RPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
P +TSS+TT +P+T T P+ T+T T K TST
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTST 627
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/95 (24%), Positives = 35/95 (36%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADEN 374
+P T++ T P T TP + T+T T + PT+ P+ P +
Sbjct: 668 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTT--PVVTTPSTIT-PTTRP 724
Query: 375 GYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPP 479
QP P+ P+ P + S A A P
Sbjct: 725 VTQPASQPATQPATTPTTTIPTTTQFSSAVSVALP 759
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/95 (24%), Positives = 35/95 (36%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADEN 374
+P T++ T P T TP + T+T T + PT+ P+ P +
Sbjct: 724 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTT--PVVTTPSTIT-PTTRP 780
Query: 375 GYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPP 479
QP P+ P+ P + S A A P
Sbjct: 781 VTQPASQPATQPATTPTTTIPTTTQFSSAVSVALP 815
Score = 27.9 bits (59), Expect = 10.0
Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Frame = +3
Query: 210 TSSSTTRPATEFTPRLKVPSRTSTQNTP---PSKLRVPTSTLP--LDGQPIDLAYVADEN 374
T+ T++ +P L + + +TP P PT+T QP V N
Sbjct: 510 TTVGTSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTN 569
Query: 375 GYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC*DKSRQQHTATS 545
P + P P + G P P S + + P S+ T TS
Sbjct: 570 SVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTS 626
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/95 (24%), Positives = 35/95 (36%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADEN 374
+P T++ T P T TP + T+T T + PT+ P+ P +
Sbjct: 547 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTT--PVVTTPSTIT-PTTRP 603
Query: 375 GYQPQGSPSAHPSPNSRGDRPRSCLHSRATPPAPP 479
QP P+ P+ P + S A A P
Sbjct: 604 VTQPASQPATQPATTPTTTIPTTTQFSSAVSVALP 638
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +3
Query: 249 PRLKVPSRTSTQNTP--PSKLRVPTS-TLPLDGQPIDLAYVADENGYQPQGSPSAHPSPN 419
P+ P T + NTP P + VP S T G PI+ P GSPSA P
Sbjct: 96 PQGHFPGNTGSSNTPTLPGVIGVPPSVTGHPGGSPIN-----------PDGSPSAGPGDK 144
Query: 420 SRGDRPRSCLHSRATPPAPP 479
+ SC A P P
Sbjct: 145 CNCNTENSCPAGPAGPKGTP 164
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +1
Query: 328 PWTDNPSTSPTSLTRTVTNPREAHLPTPHPIPEAIARALAYIRGPPPQPLRRGKKSRRQL 507
P + P+ T+ T P +A P P P+P + PPP P +
Sbjct: 231 PAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVP-------SPPPPPANTTVTEEKTT 283
Query: 508 VRISQDNNIPPLVQT 552
V + D P V T
Sbjct: 284 VPPATDEPAPKTVAT 298
>Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical
protein ZK218.11 protein.
Length = 270
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 393 SPSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPTC 509
+P+ P P + RP C + AT P P + TC
Sbjct: 81 TPAVQPVPGASTARPLKCYAAAATDPVNPDLVNAAVSTC 119
>Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical
protein C34C12.2 protein.
Length = 679
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Frame = +3
Query: 207 ATSSSTTRPA--TEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYV------ 362
A++SS R TE PR+ + TQ P V +S + P Y+
Sbjct: 108 ASTSSPVRQQVKTEIVPRVSQRTIVKTQALPRVNAPVLSSVPAKNPLPPKFVYINTAGLK 167
Query: 363 --ADENGYQPQGSPSAHPSPNSRGDRPRSCLHSRAT 464
D++ P S S +P+SRGD+ + +H + T
Sbjct: 168 RKRDDDKNTPSTSNSITLNPSSRGDQTQFIVHLQRT 203
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 210 TSSSTTRPAT-EFTPRLKVPSRTSTQNTPPSKLRVPT 317
TSS+TT+P T T +VPS T++ P ++ P+
Sbjct: 564 TSSTTTKPTTLSTTTTTQVPSTTTSVTVPSTQKATPS 600
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 KVPSRTSTQNTPPSKLRVPTSTLPLDGQPID--LAYVADENGYQPQGSPSAHPSPNSRGD 431
K+ T++ PP+ P P ++ + + + G+ S+ P P
Sbjct: 103 KIRRATTSIGPPPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPP 162
Query: 432 RPRSCLHSRATPPAPPSWKEKSS 500
P S S+ TPP PP ++K S
Sbjct: 163 -PVSVPSSKPTPPPPPPAQQKPS 184
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = +3
Query: 216 SSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENGYQPQGS 395
S TR + +PR P + PP + P+++ G I+L + D++ + S
Sbjct: 438 SGFTRAQSSISPRSFRPK----EKAPPPPSQTPSTS----GDLINL-HSGDDDDFSDDQS 488
Query: 396 PSAHPSPNSRGDRPRSCLHSRATPPAPPSWKEKSSPT 506
PS P + G RS R P PPS++ + T
Sbjct: 489 PS----PFNGGSLTRSHTEHRPNRPPPPSFRAACADT 521
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
HP T +S P + + + + +ST T PS PTST
Sbjct: 73 HPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPAPTST 115
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
HP T +S P + + + + +ST T PS PTST
Sbjct: 73 HPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPAPTST 115
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
HP T +S P + + + + +ST T PS PTST
Sbjct: 73 HPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPAPTST 115
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 195 HPWKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 323
HP T +S P + + + + +ST T PS PTST
Sbjct: 73 HPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPAPTST 115
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 343 PSTSPTSLTRTVTNPREAHLPTPHPIPE 426
P + P L+ T + P + P PHPIP+
Sbjct: 198 PPSKPADLSNTRSLPPVNNPPPPHPIPQ 225
>AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical
protein C30F12.5 protein.
Length = 392
Score = 27.9 bits (59), Expect = 10.0
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Frame = +3
Query: 264 PSRTSTQNTPPSKLRVPTSTLPLDGQPIDLAYVADENGYQPQ-GSPSAHPSPN---SRGD 431
P T+ +TP S R T + + + +P+ G P P P + G
Sbjct: 281 PPGTTVPHTPNSTYRYRVDTNRKGQKDYENGSMGQLPIDEPRIGHPLYSPLPPIDPTYGT 340
Query: 432 RPRSCLHSRATPPAP--PSWKEKSSPTC*DKSRQQHTAT 542
PR+ L PP P PS+ + P D R+Q T T
Sbjct: 341 IPRARLAPNGAPPPPLSPSYSSGNDPHFLDPRRKQETQT 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,051,550
Number of Sequences: 27780
Number of extensions: 307355
Number of successful extensions: 1780
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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