Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K22
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    33   0.004
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    28   0.11 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   4.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   5.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.3  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 0.004
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +1

Query: 154 HEFSRT-RLGDAIDKTSLKILKESYNLADDKNVIASPSRRDAAAFLGT-SLGAGA-QSKG 324
           H   RT R+G+    TS     +  NLA D   I S ++++   +LG+ S G  A Q  G
Sbjct: 495 HRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQFGG 554

Query: 325 RD-KGNPWGRG 354
           RD +G+ +GRG
Sbjct: 555 RDIRGDDFGRG 565


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +1

Query: 220 SYNLADDKNVIASPSRRDAAAFLGTSLGAGAQSKGRDKGNPWGRGGSRVITHIR 381
           +Y +AD   V++     D   ++  S   G+ +  +D+G P GR G++++ H++
Sbjct: 134 AYLVADKVTVVSK--NNDDEQYVWESSAGGSFTVTQDRGEPLGR-GTKIVLHMK 184


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 492 ICSEAKWTTLTSALRRMPLISSTVGR 569
           +  ++KW   ++ +  MPL++  +GR
Sbjct: 413 LAEDSKWRVRSAIIEYMPLLAGQLGR 438


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 641 CNGPWRGQFCLRSQES 594
           C+ PWR  +C   Q++
Sbjct: 75  CDYPWRSNYCDNKQQA 90


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 100 VYP*RVALRLI---PGRTKLTQNLKD 32
           VYP     RL+   PG+TK+  +LKD
Sbjct: 88  VYPTPYGGRLVWTLPGKTKMIAHLKD 113


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 100 VYP*RVALRLI---PGRTKLTQNLKD 32
           VYP     RL+   PG+TK+  +LKD
Sbjct: 402 VYPTPYGGRLVWTLPGKTKMIAHLKD 427


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 70  IPGRTKLTQNLKDSL 26
           +PG+TK+  +LKD +
Sbjct: 676 LPGKTKMIAHLKDKM 690


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 70  IPGRTKLTQNLKDSL 26
           +PG+TK+  +LKD +
Sbjct: 676 LPGKTKMIAHLKDKM 690


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 100 VYP*RVALRLI---PGRTKLTQNLKD 32
           VYP     RL+   PG+TK+  +LKD
Sbjct: 635 VYPTPYGGRLVWTLPGKTKMIAHLKD 660


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 329 SLPLDCAPAPRLVP 288
           SLPLD  P P L P
Sbjct: 49  SLPLDLEPLPSLFP 62


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 100 VYP*RVALRLI---PGRTKLTQNLKD 32
           VYP     RL+   PG+TK+  +LKD
Sbjct: 635 VYPTPYGGRLVWTLPGKTKMIAHLKD 660


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 70  IPGRTKLTQNLKDSL 26
           +PG+TK+  +LKD +
Sbjct: 676 LPGKTKMIAHLKDKM 690


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 70  IPGRTKLTQNLKDSL 26
           +PG+TK+  +LKD +
Sbjct: 676 LPGKTKMIAHLKDKM 690


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 356 PPLPQGFPLSLP 321
           PPLPQ  PL LP
Sbjct: 175 PPLPQVPPLPLP 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,086
Number of Sequences: 336
Number of extensions: 4524
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)