Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K22
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0750 - 6315126-6315896,6316371-6316784 34 0.13
07_01_0860 - 7142913-7144895 33 0.30
09_04_0180 + 15367737-15367755,15368874-15369739 31 1.2
02_01_0263 + 1743661-1743694,1744939-1745236,1745318-1745417,174... 30 2.8
06_01_0282 + 2071397-2071843 29 3.7
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 29 3.7
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095... 29 4.9
11_01_0771 + 6453130-6454488 29 4.9
09_02_0226 - 6007656-6008063,6012166-6012678 29 4.9
10_08_0492 + 18292208-18292248,18292874-18293365,18294139-182943... 29 6.5
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 29 6.5
02_01_0569 - 4190114-4190497 28 8.6
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 383 LLNQRYAEFXPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 556
+L R P+ L A ++ L+ F A N++ S +F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 557 NRWADEQTQGHIKTPVSEDKIDPATG 634
N W + T+G + T + ID TG
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTG 172
>07_01_0860 - 7142913-7144895
Length = 660
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -3
Query: 407 ILRNADLIIRMCVMTLEPPLPQGFPLSLPLDCAPAPRLVPRKAAASRREGDAIT 246
+LR A ++ + V P +G P + P D A A R++PR+ A+ G A T
Sbjct: 1 MLRLAVFLLPLAVAAASPAPARG-PTACPYDLATATRMIPRECYANATAGQAAT 53
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 359 EPPLPQGFPLSLPLDCAPAPRLVPRKAAASR 267
EPP P+ P +P +P PRL+PR A R
Sbjct: 178 EPPTPKPIPTPIP---SPPPRLIPRSFLAKR 205
>02_01_0263 +
1743661-1743694,1744939-1745236,1745318-1745417,
1745500-1745766,1745859-1745936,1746023-1746124,
1746205-1746254,1746347-1746446,1746550-1746648,
1746742-1746858,1747187-1747313,1747396-1747793,
1747900-1748004
Length = 624
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -3
Query: 689 LNGTCQCPLEENDVKHCNGPWRGQFCLR---SQESLCVLESVRPPNG 558
L G C CP +K GPW+ Q L S E+ C + V NG
Sbjct: 316 LGGACTCPEYGGCLKAEKGPWKDQNILNIVLSGEAQCARQIVTVSNG 362
>06_01_0282 + 2071397-2071843
Length = 148
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +1
Query: 265 RRDAAAFLGTSLGAGAQSKGRDKGNP---WGRGGSR 363
RR AA G G KGR +GNP +GRGG R
Sbjct: 99 RRYAATGSGARWDGGDDRKGRREGNPNPRFGRGGER 134
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 772 FGFTLKTKNWGAKMIELPYKEPGFRMGRG 858
F FT +T+ W AKM++ Y PG ++ RG
Sbjct: 90 FDFTEETRQWVAKMMD--YNVPGGKLNRG 116
>12_02_1177 -
26708215-26708309,26708355-26708392,26708476-26709563,
26709826-26709945,26710018-26710098,26710696-26710812,
26711122-26711904
Length = 773
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +2
Query: 440 IYVSDQYKLADAFSRTANLFRS--EVDNINFSAPKNAADIINRWAD--EQTQGHIKTPVS 607
I + D Y+ A F N+F DN + K +W E G+ +
Sbjct: 604 ITLKDGYRSAAHFMSLHNMFEKMETTDNPTYEKIKTKLSKYTKWKKGVEAPDGNTHLKET 663
Query: 608 EDKIDPATGR 637
D IDPATGR
Sbjct: 664 LDFIDPATGR 673
>11_01_0771 + 6453130-6454488
Length = 452
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 664 RGHWHVPFNASETEEKDF--HGR*KNDHQEADNASLTVFGFTLKTKNWGAKMIELPYKEP 837
+G W PFN S+TE K F H AD ++ + + G K+++L Y+ P
Sbjct: 213 KGKWDRPFNESDTERKPFYRHDGAAAAAAVADVPYMSSRSYQRVAVHDGFKVLKLRYRSP 272
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 472 RVLQDSESVQKRSGQH*LQRSEECR*YHQPLGGRTDSRTHKDSCERR 612
R L+D ++Q + + CR +PL R D RTH+ +C RR
Sbjct: 218 RPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRR 264
>10_08_0492 +
18292208-18292248,18292874-18293365,18294139-18294319,
18294388-18294442,18294473-18294592,18295335-18295465,
18295691-18295891
Length = 406
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 175 LGDAIDKTSLK-ILKESYNLADDKNVIASPSRRD---AAAFLGTSL 300
LG++ D TS + ++ S+N+ DD + PSR D A A L TSL
Sbjct: 39 LGESFDTTSSQDLITASHNIIDDGSSSTCPSRIDKPVADATLSTSL 84
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 365 TLEPPLPQGFPLSLPLDC 312
+L PPLP G PLS P C
Sbjct: 751 SLRPPLPPGLPLSSPFVC 768
>02_01_0569 - 4190114-4190497
Length = 127
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 371 VMTLEPPLPQGFPLSLPLDCAPAPRLVPRKAAASRREGDA 252
V+ P L P C PAPR PR AA RR+ DA
Sbjct: 32 VVLCSTPTAAASVLRAPSVCPPAPRKPPR-PAAKRRKKDA 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,537,693
Number of Sequences: 37544
Number of extensions: 542533
Number of successful extensions: 1713
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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