Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K22
         (883 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      38   0.014
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      37   0.019
SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24)                     29   5.0  
SB_10486| Best HMM Match : FGF (HMM E-Value=5.7e-20)                   29   6.6  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +2

Query: 422 LTVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAPKNAA-DIINRWADEQTQGHIK 595
           + +AN+++    +++ + F + +   F +E+  +++    N A D +NRW +++T+  IK
Sbjct: 87  ILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIK 146

Query: 596 TPVSEDKIDPATGRCNV*RHFLPGGTGTFRSTQVKQKKKIST 721
             + E   +  T  C V   +  G      +    Q  K  T
Sbjct: 147 NLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKT 188


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +2

Query: 422 LTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIK 595
           + + NKI+  D++++ + F   T   + SE+  ++F +   +A   +N W  +QT+G+IK
Sbjct: 55  IQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIK 114

Query: 596 TPVSEDKIDPAT 631
             +    I+  T
Sbjct: 115 ELIPHGVINSLT 126


>SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 84

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 435 IKYTFPTSISWPTRSPGQRICSEAKWTTLTSALRRMPL 548
           + ++FP    WP+    QR+ S   W ++ +  RR PL
Sbjct: 40  VYWSFPQLDPWPSVLAFQRVASHHSWPSVLACQRRGPL 77


>SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24)
          Length = 685

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 326 LPLDCAPAPRLVPRKAAASRREGDAIT 246
           LPL C P P  V  +  +SRR G+ IT
Sbjct: 291 LPLSCFPFPNPVKTENTSSRRPGEIIT 317


>SB_10486| Best HMM Match : FGF (HMM E-Value=5.7e-20)
          Length = 344

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/52 (28%), Positives = 19/52 (36%)
 Frame = +1

Query: 568 GRTDSRTHKDSCERRQN*PRHGPLQCLTSFSSRGHWHVPFNASETEEKDFHG 723
           G T    H  S E   N  +      L  F+  GHW + F+   T    F G
Sbjct: 102 GETSESLHFKSLEGHLNGEKVDSRPILDFFAGSGHWTIDFSGQTTTTTGFFG 153


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,210,382
Number of Sequences: 59808
Number of extensions: 621240
Number of successful extensions: 1801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)