Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K22
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    38   0.013
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    38   0.013
U97008-3|AAB52308.1|  380|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF098989-2|AAK18954.3|  346|Caenorhabditis elegans Hypothetical ...    29   4.4  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +2

Query: 422 LTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKT 598
           + VAN I+    + +   + +    L+ +    +NF   + +A+ IN +  E T+GHIK 
Sbjct: 93  VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKK 152

Query: 599 PVSEDKI 619
            ++ D I
Sbjct: 153 IINPDSI 159


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +2

Query: 422 LTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKT 598
           + VAN I+    + +   + +    L+ +    +NF   + +A+ IN +  E T+GHIK 
Sbjct: 93  VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKK 152

Query: 599 PVSEDKI 619
            ++ D I
Sbjct: 153 IINPDSI 159


>U97008-3|AAB52308.1|  380|Caenorhabditis elegans Hypothetical
           protein C03G6.8 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 737 SFFHRPWKSFSSVSLALNGTCQ 672
           S F+  W SFSS+   L GTCQ
Sbjct: 141 SSFNPQWSSFSSLKYLLEGTCQ 162


>AF098989-2|AAK18954.3|  346|Caenorhabditis elegans Hypothetical
           protein F47G6.3 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +2

Query: 659 LPGGTGTFRSTQVKQKKKISTVDEKTTIKKPTMRLLQSLVLH*KRRIGVQR 811
           +PG      + + +QK K S V++K  IKK T+R   + + +  +R G+ +
Sbjct: 127 VPGKNSKAMAVETEQKSKESKVEKKEEIKKKTVRRETNFITY--KRPGINK 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,527,768
Number of Sequences: 27780
Number of extensions: 445801
Number of successful extensions: 1204
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)