Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K22
         (883 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    30   2.4  
At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR...    29   5.4  
At1g31250.1 68414.m03825 proline-rich family protein contains pr...    29   5.4  
At2g37960.1 68415.m04659 expressed protein                             28   9.5  

>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 422 LTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-PKNAADIINRWADEQTQGHIK 595
           L+ A  +++        +F     N + +  + ++F+  P    + +N WA+  T G IK
Sbjct: 92  LSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIK 151

Query: 596 TPVSEDKI 619
             +S+D I
Sbjct: 152 EILSDDSI 159


>At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1046

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 157  EFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPSRRDAAAFLGTSLG 303
            EFS T++GD I +  ++I+ E     D    +     R AAA LG  LG
Sbjct: 950  EFSHTKIGDKIIECGVQIMTEGAE-GDSSRELEVLKLRVAAAQLGDLLG 997


>At1g31250.1 68414.m03825 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965;
           similar to prolin rich protein GB:S44189 GI:433706 from
           [Zea mays]
          Length = 165

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 401 RNADLIIRMCVMTLEPPLPQGFPLSLPLDCAPAPRLVPRKAAAS 270
           R     I  C  +  PP+P    LS+P + +P+ +L P  A+ S
Sbjct: 28  REGKACIGNCYGSSAPPVPPNASLSIPPNSSPSVKLTPPYASPS 71


>At2g37960.1 68415.m04659 expressed protein
          Length = 480

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 443 YVSDQYKLADAFSRTANLFRSEVDNINFSAP 535
           ++ D+Y   + FS+T +LFRSE  ++  ++P
Sbjct: 26  FLVDRYLCDNRFSKTRSLFRSEASSLISNSP 56


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,450,910
Number of Sequences: 28952
Number of extensions: 419105
Number of successful extensions: 1290
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2077687200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)