Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K20
(837 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 234 6e-62
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 121 5e-28
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 101 8e-22
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 101 8e-22
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 98 6e-21
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 89 3e-18
At5g13650.2 68418.m01585 elongation factor family protein contai... 85 4e-17
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 84 1e-16
At5g13650.1 68418.m01584 elongation factor family protein contai... 83 2e-16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 80 2e-15
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 69 5e-12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 69 5e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 53 2e-07
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 37 0.014
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 36 0.044
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 36 0.044
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 36 0.044
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 36 0.044
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 36 0.044
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.18
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.72
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 1.3
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 1.3
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 1.3
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 2.2
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 2.9
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.9
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 3.8
At1g23000.1 68414.m02874 heavy-metal-associated domain-containin... 29 5.1
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 6.7
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 28 6.7
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 234 bits (572), Expect = 6e-62
Identities = 121/198 (61%), Positives = 143/198 (72%)
Frame = +3
Query: 111 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 290
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 291 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 470
DE +R ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVT
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVT 116
Query: 471 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQ 650
AALR+TDGAL QTETVLRQA+ ERI+P+L +NKMDR YQ
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQ 176
Query: 651 TFQRIVENVNVIIATYND 704
TF R++EN NVI+ATY D
Sbjct: 177 TFSRVIENANVIMATYED 194
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 121 bits (292), Expect = 5e-28
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Frame = +3
Query: 159 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 332
R +RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSS 66
Query: 333 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 512
IS+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 67 ISLKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVD 106
Query: 513 XXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 692
QT VLRQA E++ P L +NK+DR Y RIV VN I++
Sbjct: 107 AVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVS 166
Query: 693 TYNDD 707
Y +
Sbjct: 167 AYKSE 171
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 101 bits (241), Expect = 8e-22
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Frame = +3
Query: 141 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 311
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 312 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 491
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 492 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVE 671
GA+ TE +R AI + + ++ +NK+DR Y + +E
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIE 294
Query: 672 NVNVIIATYNDDGGPMG*XACXP*XG-LWLVSGLVFMGWGFXPQTILR 812
+N I+ + G + P G + SG GW F Q+ +
Sbjct: 295 VINNHISAASTTAGDL--PLIDPAAGNVCFASGTA--GWSFTLQSFAK 338
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 101 bits (241), Expect = 8e-22
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Frame = +3
Query: 141 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 311
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 312 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 491
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 492 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVE 671
GA+ TE +R AI + + ++ +NK+DR Y + +E
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIE 294
Query: 672 NVNVIIATYNDDGGPMG*XACXP*XG-LWLVSGLVFMGWGFXPQTILR 812
+N I+ + G + P G + SG GW F Q+ +
Sbjct: 295 VINNHISAASTTAGDL--PLIDPAAGNVCFASGTA--GWSFTLQSFAK 338
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 98.3 bits (234), Expect = 6e-21
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Frame = +3
Query: 141 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRC 311
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 312 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 491
I+IK+ +S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ D
Sbjct: 176 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLAD 220
Query: 492 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVE 671
GA+ TE +R AI + + ++ +NK+DR Y + +E
Sbjct: 221 GAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIE 280
Query: 672 NVNVIIATYNDDGGPMG*XACXP*XG-LWLVSGLVFMGWGFXPQTILR 812
+N I+ + + + P G + SG GW F Q+ R
Sbjct: 281 VINNHISAASTNAADL--PLIDPAAGNVCFASGTA--GWSFTLQSFAR 324
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 89.0 bits (211), Expect = 3e-18
Identities = 54/148 (36%), Positives = 80/148 (54%)
Frame = +3
Query: 165 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 344
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 345 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 524
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Query: 525 XXXQTETVLRQAIAERIKPILFMNKMDR 608
QT A + + +NK+D+
Sbjct: 172 VQAQTVANFYLAFEANLTIVPVINKIDQ 199
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 85.4 bits (202), Expect = 4e-17
Identities = 52/169 (30%), Positives = 86/169 (50%)
Frame = +3
Query: 102 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 281
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 282 DTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSS 461
D+ E++R ITI S S+ + K +N+ID+PGH DF
Sbjct: 122 DSNDLERERGITILSKNTSITY--------------------KNTKVNIIDTPGHSDFGG 161
Query: 462 EVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
EV L + DG L QT VL++A+ ++ +NK+DR
Sbjct: 162 EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 210
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 84.2 bits (199), Expect = 1e-16
Identities = 55/148 (37%), Positives = 76/148 (51%)
Frame = +3
Query: 162 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 341
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 342 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 521
+ E+ F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYEDTP----------------FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 522 XXXXQTETVLRQAIAERIKPILFMNKMD 605
QT + A+ ++ I +NK+D
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLNKID 215
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 83.4 bits (197), Expect = 2e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 326
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 506
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 136 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 175
Query: 507 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
QT VL++A+ ++ +NK+DR
Sbjct: 176 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 209
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKS 326
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITS 151
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 506
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 152 AATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICL 191
Query: 507 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
Q+ETV RQA + I F+NKMDR
Sbjct: 192 FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDR 225
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 68.5 bits (160), Expect = 5e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 311
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 312 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 491
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 492 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 68.5 bits (160), Expect = 5e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 311
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 312 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 491
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 492 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Frame = +3
Query: 117 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 296
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 297 EQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAA 476
E+ R ITI + + +E E + +D PGH D+ +
Sbjct: 123 ERARGITINTATVE--YETENRHYAH------------------VDCPGHADYVKNMITG 162
Query: 477 LRVTDGALXXXXXXXXXXXQT-ETVLRQAIAERIKPILFMNKMDR 608
DGA+ QT E +L ++F+NK D+
Sbjct: 163 AAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQ 207
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 171 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 350
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 351 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 500
EE++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 35.5 bits (78), Expect = 0.044
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 326
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 500
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 35.5 bits (78), Expect = 0.044
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Frame = +3
Query: 171 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 350
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + + +E
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE--YE 126
Query: 351 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 530
++ +D PGH D+ + DG +
Sbjct: 127 TAKRHYAH------------------VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPM 168
Query: 531 XQTETVLRQAIAERIKPIL-FMNKMD 605
QT+ + A + ++ F+NK+D
Sbjct: 169 PQTKEHILLARQVGVPSLVCFLNKVD 194
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.044
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 326
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 500
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.044
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 326
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 500
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.044
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 147 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 326
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 327 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 500
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 429 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
+D+PGH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 174 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 275
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 405 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 584
+ G I +D+PGH FS VTD + QT + A + + +
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVV 324
Query: 585 LFMNKMDR 608
+ +NK D+
Sbjct: 325 VAINKCDK 332
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 174 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 266
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 547 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 449
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 547 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 449
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 483 VTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 608
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 184 SPTSITASQPSRTRWFPRPVSLLVRE 261
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 202 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 363
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 420 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 599
I +ID+PGH F++ + + D A+ QT L +K I+ +NK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNK 617
Query: 600 MDR 608
+DR
Sbjct: 618 VDR 620
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 184 SPTSITASQPSRTRWFPRPVSLLVRE 261
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g23000.1 68414.m02874 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains PF00403 Heavy-metal-associated
domain
Length = 358
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 149 HHPTDLVYREIHHFRWFMIFVLLNQLPYASNGVRFQILRIPYS 21
HHP ++ R++ H M++ + +P +SNG + PYS
Sbjct: 277 HHPMNMQSRQMMHQPQQMMYQRSSFVPASSNGYYYNYTPSPYS 319
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 111 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 290
M +F D+IR +D K ++ +H D + ++ R T TR
Sbjct: 484 MKDFVRDQIRAALDPKGKRPEQTIPSH-DSREPPISMDKAPVTAKKPSRRMSTKGSTGTR 542
Query: 291 KDEQDRCIT--IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSS 461
K + ++ + + A+S+ +E+DL PD ++ +GF+ + DF++
Sbjct: 543 KSSRLTRVSHDVDTPALSVGCNSKEEDLDVPGEPDSNKEDMQGFIDEHDGANNESDFTA 601
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 569 LGNSLTQYCFGLYTHTRHTVNNHKGSISDTECSCYFRREIN 447
L N + C Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,075,012
Number of Sequences: 28952
Number of extensions: 380738
Number of successful extensions: 1176
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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