Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K19
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.47
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 32 0.47
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.1
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 30 1.9
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 1.9
07_01_0080 + 587674-588510 30 2.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.8
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.8
03_01_0515 - 3864796-3865425 29 5.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.6
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 28 7.6
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 702 KXXNPQPXGGGXXPPXPPXNXXXXXPPPPG 791
K P P G PP PP PPPPG
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 357 PPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP K K PPPPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPP 341
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGGPPPP 380
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +1
Query: 544 GGGGXXP-----PPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
GGGG P PPPP + G AA K PPPPP
Sbjct: 25 GGGGFSPTAAKPPPPPSPRANG--TAAAAKPSASPPPPPP 62
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP AA K PPPPP
Sbjct: 668 PPPPPRSSSRTPTGAATSSKGPPPPPPPP 696
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP + A K PPPPP
Sbjct: 667 PPPPPPRSSSRTPTGAATSSKGPPPPPPP 695
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP G A PPPPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPP 574
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 548 GGGXXPPPPPXKXXVXXGXXPXXKKNXXXXPPPXSFFL 661
GGG P PPP + G P PPP S +L
Sbjct: 7 GGGGYPYPPPQQYPYPYGQYPYQYPPPQQQPPPPSAYL 44
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP + G K+ PPPPP
Sbjct: 14 PPPPPFGRGGGGAGYPRGHKQLYAPPPPP 42
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 690 FXKKKXXNPQPXGGGXXPPXPPXNXXXXXPPPP 788
F + P P G PP PP PPPP
Sbjct: 88 FRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 97 PPPSSGSPPPPPPPPPPPPPPPPPP 121
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 675 HPXLXFXKKKXXNPQPXGGGXXPPXPPXNXXXXXPPPPG 791
HP +P G G PP PP P PPG
Sbjct: 327 HPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPG 365
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P G G PP PP PPPP
Sbjct: 1101 PPSIGAGAPPPPPPPGGITGVPPPP 1125
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPPPP 640
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPP 945
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P G PP PP PPPP
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPP 86
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/50 (28%), Positives = 18/50 (36%)
Frame = +3
Query: 639 PPPXXFFXXXKXHPXLXFXKKKXXNPQPXGGGXXPPXPPXNXXXXXPPPP 788
PPP ++ P + P P PP PP + PPPP
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPP-----PPPSPPPSAPPPPPPPP 128
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP + A + PPPPP
Sbjct: 58 PPPPPLPQPQHHHDAVSTDESRTPPPPPP 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,102,110
Number of Sequences: 37544
Number of extensions: 396956
Number of successful extensions: 2428
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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