Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K19
(809 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 33 0.22
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 30 2.1
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 30 2.1
At2g18470.1 68415.m02151 protein kinase family protein contains ... 30 2.1
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 2.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 3.7
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 3.7
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 29 3.7
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 3.7
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 29 4.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 8.4
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPPG 791
P P GGG PP PP PPPPG
Sbjct: 683 PPPPGGG--PPPPPGGGPPPPPPPPG 706
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPPG 791
P GGG PP PP PPPPG
Sbjct: 672 PPLPGGGPPPPPPPPG--GGPPPPPG 695
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 566 PPPPXKXXVXXGXXPXXKKNXXXXPPPXSFFLXXKXPP 679
PPPP V G KK PPP S + K P
Sbjct: 77 PPPPVSAAVTNGETDKDKKEKPPPPPPGSVAVPVKDQP 114
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 566 PPPPXKXXVXXGXXPXXKKNXXXXPPPXSFFLXXKXPP 679
PPPP V G KK PPP S + K P
Sbjct: 77 PPPPVSAAVTNGETDKDKKEKPPPPPPGSVAVPVKDQP 114
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 544 GGGGXXPPPPPXKKXXGXWXAA-XXKKKXXXPPPPP 648
GGGG PPPPP G + + PPP P
Sbjct: 226 GGGGPSPPPPPRMPTSGEDSSMYSGPSRPVLPPPSP 261
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 544 GGGGXXPPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
G PPPPP KK G KK PP PP
Sbjct: 404 GPAAPPPPPPPGKKGAGPPPPPPMSKK--GPPKPP 436
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXK-KKXXXPPPPP 648
PPPPP KK KK PPPPP
Sbjct: 396 PPPPPPKKGPAAPPPPPPPGKKGAGPPPPP 425
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP KK PPPPP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPPPP 412
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P PP PP PPPP
Sbjct: 387 PPPPSAAAPPPPPPPKKGPAAPPPP 411
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPP 788
P P PP PP PPPP
Sbjct: 388 PPPSAAAPPPPPPPKKGPAAPPPPP 412
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPP 785
P P GG PP PP PPP
Sbjct: 393 PPPGSGGPKPPPPPGPKGPRPPPP 416
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPP 785
P P GG PP PP PPP
Sbjct: 393 PPPGSGGPKPPPPPGPKGPRPPPP 416
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/83 (30%), Positives = 27/83 (32%)
Frame = -3
Query: 801 KXXARGGXGXXXXXXXXGXGGXXPPPXVVGXXVFFXKXKXXGGXXXXKKXXXGGGXXXXF 622
K +GG G G GG P G V + GG KK GGG
Sbjct: 343 KNGGKGGGGHPLDGKMGGGGGG-PNGNKGGGGV-----QMNGGPNGGKKGGGGGGGGGGG 396
Query: 621 FFXXGXXPXXTXFFXGGGGGXXP 553
G P GGGGG P
Sbjct: 397 PMSGGLPPGFRPMGGGGGGGGGP 419
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 714 PQPXGGGXXPPXPPXNXXXXXPPPPG 791
P P PP PP + PPPPG
Sbjct: 719 PPPLSKTPAPPPPPLSKTPVPPPPPG 744
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP G + K++ PPPPP
Sbjct: 619 PPPPPPPPSFG---STGNKRQAQPPPPPP 644
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXAAXXKKKXXXPPPPP 648
PPPPP G PPPPP
Sbjct: 660 PPPPPPTSHSGSIRVGPPSTPPPPPPPPP 688
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 562 PPPPPXKKXXGXWXA--AXXKKKXXXPPPPP 648
PPPPP G + + KK PPPPP
Sbjct: 368 PPPPPPPFFQGLFSSKKGKSKKNNSNPPPPP 398
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/53 (26%), Positives = 16/53 (30%)
Frame = +3
Query: 630 FXXPPPXXFFXXXKXHPXLXFXKKKXXNPQPXGGGXXPPXPPXNXXXXXPPPP 788
+ PPP + P P P PP PP PPPP
Sbjct: 500 YPPPPPPPEYEPSPPPPSSEMSPSVRAYPPPPPLSPPPPSPPPPYIYSSPPPP 552
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,869,449
Number of Sequences: 28952
Number of extensions: 233558
Number of successful extensions: 1146
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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