Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K17
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   4.8  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    28   8.5  
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544...    28   8.5  

>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 755 FAPSWAVCPNPPFXPTAAPYPVTIVL 832
           F P  AV P PP  P AAP PV + +
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAM 92


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 343 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 498
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 292 NESAN---ARGEAVCVLGALPLPRSLTRCAR 375
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 511 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 651
           CWR  +        T  D Q    +    +KD    P + PSC L+F
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIF 329


>05_01_0609 +
           5443780-5443875,5444540-5445136,5448792-5448881,
           5449615-5450121
          Length = 429

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 637 CALLFRXCRLPDTCPPFSPS-GSVALSHSSRC 729
           C L  +  RLP T PP +P+ GS+ +  +SRC
Sbjct: 135 CLLELQHRRLPSTAPPLTPTLGSICM--ASRC 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,560,808
Number of Sequences: 37544
Number of extensions: 496190
Number of successful extensions: 1520
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)