Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K16
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615     33   0.41 
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    30   2.9  
05_07_0175 - 28164252-28164529,28165381-28166560                       29   6.7  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615
          Length = 458

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +1

Query: 487 KRPGTVKRXRCWRFSIGSA--PPDEHHKNRRSSQRWRKPDRTIKIPGVSPLESSLVRSSW 660
           +R    +R + W   +G     P+   K   S     +PD     P V  L + +V  SW
Sbjct: 22  RRRSIWERGKAWGPCVGPRWRAPNAEPKRPSSQIPTAQPD-----PMVDRLRALVVNRSW 76

Query: 661 FRTLAALPGYPVPPFLP 711
             +L ALP  P+PP LP
Sbjct: 77  RTSLQALPPPPLPPQLP 93


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 370 RCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRPGTVKRXRCWRFSIGSAPP 549
           R +RS     R+  ++ R     +++  T+ R   +  S+ PG  +R        GSA P
Sbjct: 606 RYSRSPKRSRRHSRSRTRSRSRSRSRSYTRNRRASRSRSRSPGASRRHERSATGSGSALP 665

Query: 550 DEHHKNRR 573
           D  H  R+
Sbjct: 666 DSGHGERK 673


>05_07_0175 - 28164252-28164529,28165381-28166560
          Length = 485

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 622 VSPLESSLVRSSWFRTLAALPGYPVPPFLP 711
           V  + + +V  SW  +L ALP  P+PP LP
Sbjct: 27  VDRVRALVVNCSWRTSLQALPPPPLPPQLP 56


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,004,548
Number of Sequences: 37544
Number of extensions: 521457
Number of successful extensions: 1613
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)