Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K16
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2 (... 33 1.4
AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2 (... 33 1.4
AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2 (... 33 1.4
Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 pro... 30 10.0
BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 10.0
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym... 30 10.0
AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 10.0
>BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 473 SKRPAKGQEP*KGRVAGVFP*APPPLTSITKIDAQVRGGENPTGL*RYQAFPPWKAPSCA 652
S RPA P R AG P A PP ++ VRGG P G +A P+ A
Sbjct: 99 SPRPAS---PRSSRGAGPVPCAAPPQRAVLASPRSVRGGPKPPGRGGARASGGAAGPAPA 155
Query: 653 -PPGSEPWPLYRDTLFRLF 706
PPG P+ + + LF
Sbjct: 156 MPPGKVLQPVLKMKVDELF 174
>AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 473 SKRPAKGQEP*KGRVAGVFP*APPPLTSITKIDAQVRGGENPTGL*RYQAFPPWKAPSCA 652
S RPA P R AG P A PP ++ VRGG P G +A P+ A
Sbjct: 99 SPRPAS---PRSSRGAGPVPCAAPPQRAVLASPRSVRGGPKPPGRGGARASGGAAGPAPA 155
Query: 653 -PPGSEPWPLYRDTLFRLF 706
PPG P+ + + LF
Sbjct: 156 MPPGKVLQPVLKMKVDELF 174
>AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 473 SKRPAKGQEP*KGRVAGVFP*APPPLTSITKIDAQVRGGENPTGL*RYQAFPPWKAPSCA 652
S RPA P R AG P A PP ++ VRGG P G +A P+ A
Sbjct: 99 SPRPAS---PRSSRGAGPVPCAAPPQRAVLASPRSVRGGPKPPGRGGARASGGAAGPAPA 155
Query: 653 -PPGSEPWPLYRDTLFRLF 706
PPG P+ + + LF
Sbjct: 156 MPPGKVLQPVLKMKVDELF 174
>Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 protein.
Length = 1394
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 472 EQKASKRPGTVKRXRCWRFSIGSAPPDEHH--KNRRSSQRWRKPDRTIKIPGVSPLESSL 645
E S+ P ++ R +F++ S+ P H K SS P R+ +P ++ +
Sbjct: 998 EPTLSQNPLSIMMSRMSKFAMPSSTPLYHDAIKTVASSDDDSPPARSPNLPSMNNMPGMG 1057
Query: 646 VRSSWFRTLAALPGYPVPPFLPSGXAXRFSHNSR 747
+ + R P P+P P G SH+++
Sbjct: 1058 INTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQ 1091
>BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 472 EQKASKRPGTVKRXRCWRFSIGSAPPDEHH--KNRRSSQRWRKPDRTIKIPGVSPLESSL 645
E S+ P ++ R +F++ S+ P H K SS P R+ +P ++ +
Sbjct: 998 EPTLSQNPLSIMMSRMSKFAMPSSTPLYHDAIKTVASSDDDSPPARSPNLPSMNNMPGMG 1057
Query: 646 VRSSWFRTLAALPGYPVPPFLPSGXAXRFSHNSR 747
+ + R P P+P P G SH+++
Sbjct: 1058 INTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQ 1091
>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polymerase
family, member 4 protein.
Length = 1724
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 622 VSPLESSLVRSSWFRTLAALPGYPVPPFLPSGXAXRFSHNSRRXVSQFGCRSXPXQAGA 798
VSP E+S SS+F LA G +PP + S S R V+ FG + P Q A
Sbjct: 1305 VSPWETST--SSFFPILAPAVGSYLPPTARAHSPASLSFASYRQVASFGSAAPPRQFDA 1361
>AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 472 EQKASKRPGTVKRXRCWRFSIGSAPPDEHH--KNRRSSQRWRKPDRTIKIPGVSPLESSL 645
E S+ P ++ R +F++ S+ P H K SS P R+ +P ++ +
Sbjct: 998 EPTLSQNPLSIMMSRMSKFAMPSSTPLYHDAIKTVASSDDDSPPARSPNLPSMNNMPGMG 1057
Query: 646 VRSSWFRTLAALPGYPVPPFLPSGXAXRFSHNSR 747
+ + R P P+P P G SH+++
Sbjct: 1058 INTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQ 1091
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,057,680
Number of Sequences: 237096
Number of extensions: 2795805
Number of successful extensions: 9408
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9402
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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