Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K16
         (902 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g73340.1 68414.m08489 cytochrome P450 family protein similar ...    30   2.4  
At5g45050.2 68418.m05524 disease resistance protein-related simi...    29   5.6  
At5g45050.1 68418.m05523 disease resistance protein-related simi...    29   5.6  
At3g20830.1 68416.m02634 protein kinase family protein contains ...    28   7.4  
At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative s...    28   9.7  

>At1g73340.1 68414.m08489 cytochrome P450 family protein similar to
           Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana];
           contains Pfam profile: PF00067 cytochrome P450
          Length = 512

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 635 KAPSCAPPGSEPWPLYRDTLFRLFSLPGKRXAFLI 739
           +AP   PPGS  WPL  DT   L ++ G   +  +
Sbjct: 38  RAPHRLPPGSRGWPLIGDTFAWLNAVAGSHPSSFV 72


>At5g45050.2 68418.m05524 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1344

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 349  PLPRSLTRCARSFGCGERYQLTQRR 423
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193


>At5g45050.1 68418.m05523 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1372

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 349  PLPRSLTRCARSFGCGERYQLTQRR 423
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221


>At3g20830.1 68416.m02634 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 408

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 340 PIRKPPLPARWPIH*CRKNLPHL 272
           P   PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406


>At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative
           similar to nuclear RNA binding protein GI:6492264 from
           [Arabidopsis thaliana]
          Length = 357

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 734 EKRHAXPEGRKGGTGYPGKAARVRNQEERTRELSRGETPG 615
           E R+A P+G +GGTG  G  +R R      R+    + PG
Sbjct: 56  ESRNA-PQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPG 94


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,252,792
Number of Sequences: 28952
Number of extensions: 366734
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)