Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K14
(1184 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.042
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.042
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.042
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.91
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.91
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 3.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 8.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 8.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.042
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 852 PXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
P PP P P PP P P G P P S PPP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 32.7 bits (71), Expect = 0.52
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 894 PXXXPXRXPVXXXXPXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXX 715
P P P+ P PP P P PP P P G P P
Sbjct: 713 PPPPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-----PP 764
Query: 714 XSXXPPPXPPPXXAG 670
PPP PPP G
Sbjct: 765 PGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.042
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 852 PXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
P PP P P PP P P G P P S PPP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 32.7 bits (71), Expect = 0.52
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 894 PXXXPXRXPVXXXXPXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXX 715
P P P+ P PP P P PP P P G P P
Sbjct: 713 PPPPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-----PP 764
Query: 714 XSXXPPPXPPPXXAG 670
PPP PPP G
Sbjct: 765 PGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.042
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 852 PXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
P PP P P PP P P G P P S PPP PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 32.7 bits (71), Expect = 0.52
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 894 PXXXPXRXPVXXXXPXXRXPPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXX 715
P P P+ P PP P P PP P P G P P
Sbjct: 296 PPPPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-----PP 347
Query: 714 XSXXPPPXPPPXXAG 670
PPP PPP G
Sbjct: 348 PGGCPPPPPPPPPGG 362
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.69
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +2
Query: 683 GGGXGGGXXXXXXXXXXRGXXGXPXNXAGXXXGVGGXGVXXXXXGXVRXXGGXRXXGXXX 862
GGG GGG G G N G G GG G G R GG G
Sbjct: 65 GGGRGGGWGNNGGGGNW-GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Query: 863 XTGXRXGXXXG 895
G R G G
Sbjct: 124 GGGGRGGGGRG 134
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.91
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = -3
Query: 882 PXRXPVXXXXPXXRXPPXXRTX--PXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXS 709
P P P PP RT P P PP P G P P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 708 XXPPPXPPPXXAG 670
PPP P AG
Sbjct: 347 MPPPPPPRYPSAG 359
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.91
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = -3
Query: 882 PXRXPVXXXXPXXRXPPXXRTX--PXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXS 709
P P P PP RT P P PP P G P P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 708 XXPPPXPPPXXAG 670
PPP P AG
Sbjct: 357 MPPPPPPRYPSAG 369
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect(2) = 3.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 837 PPXXRTXPXXXXXTPXPPTPLXXPAXFXGXPXHPRXXFXXXXSXXPPPXPP 685
PP P P PP P P G P P + PPP PP
Sbjct: 507 PPLLGIAPMSTNAPPPPPMPGMAPLS-TGAPTPPPPPPVGMANGGPPPPPP 556
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3
Query: 702 PPPXPPP 682
PPP PPP
Sbjct: 576 PPPPPPP 582
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = -3
Query: 951 PSTASXXXXASXSGXRXXTPXXXPXRXPVXXXXPXXRXPPXXRTXPXXXXXTPX----PP 784
PS ++ + + TP P P PP P P PP
Sbjct: 662 PSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPP 721
Query: 783 TPLXXPAXFXGXPXH-PRXXFXXXXSXXPPPXPP 685
P P + G P + P PPP P
Sbjct: 722 GPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAP 755
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.5
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +2
Query: 671 PAXXGGGXGGGXXXXXXXXXXRGXXGXPXNXAGXXXGVGGXGVXXXXXGXVRXXGGXRXX 850
PA GGG GGG G G G G GG G G GG
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGG-CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Query: 851 GXXXXTGXRXGXXXG 895
G G G G
Sbjct: 135 GGGGCGGGSSGGCGG 149
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.5
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +2
Query: 671 PAXXGGGXGGGXXXXXXXXXXRGXXGXPXNXAGXXXGVGGXGVXXXXXGXVRXXGGXRXX 850
PA GGG GGG G G G G GG G G GG
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGG-CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Query: 851 GXXXXTGXRXGXXXG 895
G G G G
Sbjct: 135 GGGGCGGGSSGGCGG 149
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -3
Query: 837 PPXXRTXPXXXXXTPXPPTPLXX--PAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
PP P PP P+ P G P P + PPP PPP
Sbjct: 202 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -3
Query: 837 PPXXRTXPXXXXXTPXPPTPLXX--PAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
PP P PP P+ P G P P + PPP PPP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -3
Query: 837 PPXXRTXPXXXXXTPXPPTPLXX--PAXFXGXPXHPRXXFXXXXSXXPPPXPPP 682
PP P PP P+ P G P P + PPP PPP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,868,936
Number of Sequences: 27780
Number of extensions: 126736
Number of successful extensions: 1154
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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