Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K13
(864 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 207 2e-52
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 188 2e-46
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 156 8e-37
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 149 7e-35
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 142 8e-33
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 142 1e-32
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 137 3e-31
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 136 7e-31
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 130 6e-29
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 127 3e-28
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 127 4e-28
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 122 9e-27
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 98 2e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 95 2e-18
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 71 5e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 71 5e-11
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 67 6e-10
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 66 1e-09
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 8e-06
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 50 1e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 43 0.012
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.14
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.19
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.43
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ... 36 1.7
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 2.3
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 4.0
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 34 5.3
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 5.3
UniRef50_A7DH05 Cluster: Putative uncharacterized protein precur... 34 5.3
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 7.1
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 7.1
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 9.3
UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein prec... 33 9.3
UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4; Muri... 33 9.3
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 9.3
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 207 bits (506), Expect = 2e-52
Identities = 106/178 (59%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Frame = +1
Query: 88 HKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRL 267
H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+
Sbjct: 7 HNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRM 66
Query: 268 ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQL 447
R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQL
Sbjct: 67 IRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQL 126
Query: 448 ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRAN 615
AL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E+AR RRA+
Sbjct: 127 ALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERAR-GRRAS 183
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 188 bits (457), Expect = 2e-46
Identities = 95/174 (54%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +1
Query: 97 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 276
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 277 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 456
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 457 APTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 612
P TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG EKAR R++
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 156 bits (378), Expect = 8e-37
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Frame = +1
Query: 82 STHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 261
++ +H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVS
Sbjct: 6 TSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVS 65
Query: 262 RLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFD 441
R+AR +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T D
Sbjct: 66 RIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLD 125
Query: 442 QLALRAPTGKKTVLVQGQRNAREAVRHFGPAP---GAPR--SHTKPYVRTKGHEKAR 597
QLA+RAP G+ T++++G RN+REAVRHFG P APR S + + R +G +++
Sbjct: 126 QLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRRSK 182
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 149 bits (362), Expect = 7e-35
Identities = 75/145 (51%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 543
V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G AR A +HFG APG
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGR 213
Query: 544 PRSHTKPYVRTKGH--EKARPSRRA 612
P+S +PYVR+KG EKAR R++
Sbjct: 214 PKSKARPYVRSKGRKFEKARGRRKS 238
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 142 bits (345), Expect = 8e-33
Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 543
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154
Query: 544 PRSHTKPYVRTKGH--EKARPSRRA 612
+ + KPYVR+KG EKAR R +
Sbjct: 155 VKGNPKPYVRSKGRKFEKARGRRHS 179
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 142 bits (344), Expect = 1e-32
Identities = 76/147 (51%), Positives = 101/147 (68%), Gaps = 6/147 (4%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 345
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 346 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 525
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 526 GPAPGAPRSHTKPYVRTKGHEKARPSR 606
G A G P SH+KPY +G E R R
Sbjct: 160 G-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 137 bits (332), Expect = 3e-31
Identities = 65/112 (58%), Positives = 88/112 (78%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 519
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 136 bits (329), Expect = 7e-31
Identities = 71/129 (55%), Positives = 89/129 (68%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+++FN VLRRL +R R PISVSRL + + + VVVGTVT+D RL +PK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 543
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA++HFG A G
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGL 373
Query: 544 PRSHTKPYV 570
P SH KPYV
Sbjct: 374 PGSHAKPYV 382
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 130 bits (313), Expect = 6e-29
Identities = 74/166 (44%), Positives = 94/166 (56%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 459
K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 460 PTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKAR 597
PTG VL+QG+R+ R + FG +PG P SH KP KG AR
Sbjct: 130 PTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 127 bits (307), Expect = 3e-28
Identities = 62/117 (52%), Positives = 81/117 (69%)
Frame = +1
Query: 238 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 417
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 418 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 588
GG+ LTFDQLAL +P TVL+ G R RE HF A G P SHTKPYVR+KG +
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 127 bits (306), Expect = 4e-28
Identities = 77/171 (45%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Frame = +1
Query: 64 QRWVLTSTHKHDRKVRRT--EVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRI 237
Q W +K R R +V S ++ T++ FN VLRRL +R
Sbjct: 293 QSWQGVDAYKKTRVQRNVGRKVTSTNLYLKLLIKLYKFLARRTDSNFNATVLRRLQQTRT 352
Query: 238 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 417
R PISVSRL + + + VVVGTVT+DVRL +PK+ V TE AR RILAA
Sbjct: 353 ARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKIKV----FTETARKRILAA 408
Query: 418 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYV 570
GG+ LTFDQLA + PTG T+L++G R RE ++HFG A G P SH KPYV
Sbjct: 409 GGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGLPGSHAKPYV 458
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 122 bits (295), Expect = 9e-27
Identities = 64/115 (55%), Positives = 82/115 (71%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T +KF + +L RL +SR+NRP +S S+LA MKK E AV V TVT D R Y +PKM
Sbjct: 39 TQSKFAKTILHRLCLSRVNRPIVSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKM 95
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 528
V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 96 NVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/113 (43%), Positives = 71/113 (62%)
Frame = +1
Query: 244 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 423
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 424 EILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 582
+IL+FDQLA+ +P +G + + RH G G+P S+ KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 95.5 bits (227), Expect = 2e-18
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 331 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 510
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 511 AVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 612
AV+HF + + KPYVR+KG EKAR R +
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217
Score = 56.4 bits (130), Expect = 9e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 364 TVAALHVT 387
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 408
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 408
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/130 (30%), Positives = 66/130 (50%)
Frame = +1
Query: 208 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 387
+ +RL MS+ +R P+ +S++ + + + +AVVV V +D + IP + V AL +
Sbjct: 52 ISKRLKMSKSDRQPVKISKIVSEIGESKDK--VAVVVAKVLDDDEVMVIPAVKVVALQWS 109
Query: 388 EKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPY 567
+ + +I GG I T DQL P LV + +R + + +GPAPG S T P
Sbjct: 110 KGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRRSAKFWGPAPGEKGSTTYPR 169
Query: 568 VRTKGHEKAR 597
K H + +
Sbjct: 170 ANQKCHNREK 179
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1
Query: 88 HKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRL 267
H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+++SR+
Sbjct: 116 HNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLALSRM 175
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 53.2 bits (122), Expect = 8e-06
Identities = 28/102 (27%), Positives = 57/102 (55%)
Frame = +1
Query: 193 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 372
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 373 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 498
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 49.6 bits (113), Expect = 1e-04
Identities = 38/145 (26%), Positives = 70/145 (48%)
Frame = -1
Query: 612 STTTGPCFFMSLGANIGFSVRARCSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKS 433
ST+T F +S G +S+ + +V+ + S T +L S+ SQLI+S
Sbjct: 28 STSTSSSFELSTGRLDSWSLTL--VRTETEVSSSFSGSSWTSDDQGVLTLWSSNSQLIQS 85
Query: 432 KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHVARQTRHR 253
F++S Q+ +SS+ L S VI + + +++LL +R + +R
Sbjct: 86 DGFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNR 145
Query: 252 DWWPVDTAHKEPA*NDLIEFGICTS 178
+WW VD ++ ++L+E+ I T+
Sbjct: 146 NWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +1
Query: 277 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 456
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 457 APTGKKTVLV 486
P G +V
Sbjct: 112 YPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 39.1 bits (87), Expect = 0.14
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +1
Query: 241 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 420
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 421 GEILTFDQLALRAPTGKKTVLV 486
G + F +L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.19
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -2
Query: 425 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 246
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 245 GRLI 234
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.43
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 199 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 375
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 376 LHVTEKARARILAAGGEILTFDQLALRAPTG 468
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 740
Score = 37.1 bits (82), Expect = 0.57
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 448 ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSRRAN 615
A RAP G L+ R AR + R P P PR+ T+P+ + +AR SRR +
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRRGS 722
>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
TESTI4025062 - Homo sapiens (Human)
Length = 280
Score = 35.5 bits (78), Expect = 1.7
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = +3
Query: 306 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 470
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 471 EDSTGTRSAKC----S*GSASLWPCSRSTALSH*TLCSHQGT 584
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 265 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 378
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 34.3 bits (75), Expect = 4.0
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +1
Query: 187 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 363
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 489
VAA + AR +I AAGGE LT +L P G +++
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 606 TTGPCFFMSLGANIGFSVRARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSK 430
T P +++ L FS+ A W K T +I+LT Q+CLL R+T +
Sbjct: 49 TYWPIWYIELVFATLFSLNAVFDFWKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTS 108
Query: 429 NFSSSSQ 409
NF+ SS+
Sbjct: 109 NFARSSK 115
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 5.3
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 364 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 471
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_A7DH05 Cluster: Putative uncharacterized protein
precursor; n=2; Methylobacterium extorquens PA1|Rep:
Putative uncharacterized protein precursor -
Methylobacterium extorquens PA1
Length = 205
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 526 GPAPGAPRSHTKPYVRTKGHEKARPSRRANV*FLI*GLHTPXPPXPXXPPXP 681
GPAPGA ++ KP T G+ P+ +AN L P PP P P P
Sbjct: 108 GPAPGAATNNPKPEAAT-GNPADNPNAKANA--LAKNPPPPAPPAPAPKPDP 156
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -1
Query: 531 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 352
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 351 LVQ 343
L++
Sbjct: 257 LME 259
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 7.1
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +1
Query: 187 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 366
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 367 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 489
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 9.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 428 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 538
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein
precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Alpha-2-macroglobulin-like protein precursor -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 1759
Score = 33.1 bits (72), Expect = 9.3
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = +1
Query: 235 INRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILA 414
+ P ++++ L R + P ++V + + ++ + + AL V E RA LA
Sbjct: 1141 VRDPMVAMATLPRFLA-PGDRSFLSVSLDNIDGPAGVWTLAAVGEGALSVPEGPRAVDLA 1199
Query: 415 AGGEILTFDQLALRA----PTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 582
GG L +LA+ P + + RE F PGAPR + G
Sbjct: 1200 KGGRDLV--RLAVEGLNPGPGTLRLAITAPTGERREKTWSFDVRPGAPRMTLAHRLDLGG 1257
Query: 583 HEKAR 597
H +AR
Sbjct: 1258 HGRAR 1262
>UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4;
Murinae|Rep: Nuclear transition protein 2 - Mus musculus
(Mouse)
Length = 117
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 529 PAPGAPRSHTKPYVRTKGHEKARPSRRAN 615
P+PG P H KP V ++ H ARPS R +
Sbjct: 53 PSPGPPMKHPKPSVHSR-HSPARPSHRGS 80
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 33.1 bits (72), Expect = 9.3
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +1
Query: 208 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 387
+ +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 388 EKARARILAAGGEILTFDQLALRAPTG 468
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,885,860
Number of Sequences: 1657284
Number of extensions: 16368685
Number of successful extensions: 47225
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 41960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47037
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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