Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K13
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 371 ATVIFGILYSLTSFVTVPTTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 210
           +T I  I + +   VTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 76  STAILEIAFEVIFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -2

Query: 359 FGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDT--EIGGRLIRLIKSRRRTI 204
           F I Y     VT+ T  A + +  G F+W  + D   E  G    L+K+  + I
Sbjct: 322 FWIGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDDMHEFCGEKNGLLKAVNKAI 375


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +1

Query: 640  HTPXPPXPXXPPXP 681
            H P PP    PP P
Sbjct: 1375 HPPIPPTSEKPPLP 1388


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 303 QTLTSWLLHVARQTRHRDWW 244
           QTL  WL H        DW+
Sbjct: 658 QTLAMWLNHNPNYAEVTDWY 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,059
Number of Sequences: 336
Number of extensions: 4021
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)