Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K12
         (1257 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.26 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   3.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   7.4  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.26
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 314 PPXPPPXPPXXXPPXXPPPPXP 379
           PP P   PP   PP  PP   P
Sbjct: 39  PPNPSQGPPPGGPPGAPPSQNP 60


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 378 GXGGGGXXGGXXXGGXGGGXG 316
           G  GG    G   GG GGG G
Sbjct: 33  GASGGSIVVGANNGGGGGGLG 53


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 727  GAPLXNFXPGNFFXPXPLAP 786
            G P   F P NF+ P P  P
Sbjct: 1152 GMPHLPFTPFNFWNPPPFMP 1171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,571
Number of Sequences: 438
Number of extensions: 8686
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42982554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)