Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K11
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) 35 0.099
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.099
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 30 2.1
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_2976| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8e-19) 30 2.1
SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8) 30 2.1
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15) 29 4.9
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 28 8.6
>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
Length = 203
Score = 34.7 bits (76), Expect = 0.099
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 695 CVLGALPLSSPH*LX-AXRSFGCGERY 772
CVLGALPL P L RSFGCGERY
Sbjct: 113 CVLGALPL--PRSLTRCARSFGCGERY 137
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 34.7 bits (76), Expect = 0.099
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 695 CVLGALPLSSPH*LX-AXRSFGCGERY 772
CVLGALPL P L RSFGCGERY
Sbjct: 477 CVLGALPL--PRSLTRCARSFGCGERY 501
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 169 ENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 297
+NG D DG+V V D D G N+ DG+ G DGG+
Sbjct: 25 DNGDDGDDGDVDDNVCDGDGDDGDDGDNVCDGD--GDDGDGGD 65
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 790 YPLILWITVLPPLSE 804
>SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 32 YPLILWITVLPPLSE 46
>SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 55 YPLILWITVLPPLSE 69
>SB_2976| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8e-19)
Length = 255
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 614 NECNGCLLT-CLLQLIMVTNKAIASQISQIKHFFHCILVVVCP 489
N+CN LL C+L + N Q++ + F+HCI+V P
Sbjct: 103 NQCNSVLLLHCILDSCLFDN-----QVTALNRFYHCIVVADIP 140
>SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 437 YPLILWITVLPPLSE 451
>SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8)
Length = 271
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 799 VIHXIRGYPXEKTCEQKXPKRPGXRK 876
+I+ +G E+TCEQK KRPG K
Sbjct: 82 LIYLNQGITQERTCEQKASKRPGTVK 107
>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 586 YPLILWITVLPPLSE 600
>SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 54 YPLILWITVLPPLSE 68
>SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 821 YPLIXWITGLPPLGE 777
YPLI WIT LPPL E
Sbjct: 32 YPLILWITVLPPLSE 46
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 145 AIVAVNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 297
A VA ++ + GD+ DG G D D+D G + + GG DGG+
Sbjct: 185 ADVASSAVADNGDNDDGSDDDGGDNDDGSDDDDGGDDGSDDDGGDNDDGGD 235
>SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15)
Length = 347
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 814 RGYPXEKTCEQKXPKRPGXRK 876
+G E+TCEQK KRPG K
Sbjct: 116 QGITQERTCEQKASKRPGTVK 136
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 169 ENGGDSPDGEVA--PGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 297
+ GGD DG+ GVD V D+ G + G+ GG DGG+
Sbjct: 3 DGGGDGDDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGGDDDGGD 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,005,643
Number of Sequences: 59808
Number of extensions: 393271
Number of successful extensions: 1551
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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