Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K08
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0096 + 9956702-9956818,9957056-9957265                           30   2.7  
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284...    29   6.2  
03_05_1162 - 30838687-30838740,30838864-30838949,30840029-30840221     29   6.2  
01_01_1195 - 9567023-9567789,9567871-9568120                           28   8.2  
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    25   8.3  

>11_03_0096 + 9956702-9956818,9957056-9957265
          Length = 108

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +2

Query: 92  GRIVVYGGR----GALGAACVNHFKSFNYWV-ANIDLNPNEKADFNITVPKDASWVEQED 256
           GR    GGR    G + AA      + +YW   +    P+     N+ V  +    + E+
Sbjct: 13  GRAATLGGRRQLAGQVQAAARRRGHAASYWTWGSRSACPSTHGSQNVAVEMEEEEGQMEE 72

Query: 257 HVVNELG 277
           HVV ELG
Sbjct: 73  HVVQELG 79


>04_04_0465 +
           25427065-25427113,25428099-25428227,25428387-25428479,
           25428681-25428953,25429037-25429288,25429735-25430118,
           25430243-25430483,25431986-25432736
          Length = 723

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 314 CVAGGWAGGNAAKDLSKQADLMWRQSVWSSSIAAT 418
           C +G + GG   +   ++A   W    WS   AAT
Sbjct: 592 CTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAAT 626


>03_05_1162 - 30838687-30838740,30838864-30838949,30840029-30840221
          Length = 110

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 9   YYXLTIGNS*DLSQFEVVNERRRCNGYPVESSCTVVVGHWVL 134
           +Y LT+G S  L+ F+ ++   R  GY + S   + +  W L
Sbjct: 62  WYVLTLGESFPLNSFDFLSSEGRYKGYNITSEVLLGMCIWFL 103


>01_01_1195 - 9567023-9567789,9567871-9568120
          Length = 338

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +2

Query: 224 PKDASWVEQEDHVVNELGNALQGQKVNAIICVAGGWAGGNAAK 352
           P  A+  E+ED VV E      G  V   +C  G W     AK
Sbjct: 17  PATAAVGEEEDEVVEETEEGGHGGGVQGKLCARGHWRPAEDAK 59


>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
            8511209-8511523,8511576-8511682,8512559-8512629,
            8512952-8513029,8513390-8513454,8514224-8514274,
            8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 24.6 bits (51), Expect(2) = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 158  FNYWVANIDLNPNEKADFNITVPKDASWV 244
            F+YW  +   +P + ADF  T  KD+  V
Sbjct: 1452 FSYWEQSPSTSPTDIADFGKTPWKDSGKV 1480



 Score = 21.8 bits (44), Expect(2) = 8.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 47   SVRSCEREKTL*WLPGRIVVYGGRGALGAACVN 145
            +V SC + +T+  L  R  V  G G L A   N
Sbjct: 1388 TVSSCSKLETIVGLKERCEVTAGNGGLQAGQTN 1420


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,575,558
Number of Sequences: 37544
Number of extensions: 411105
Number of successful extensions: 1111
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)