Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K05
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.44 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   1.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   1.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   4.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 508 ILPLFY*LLKIFMFICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL 356
           +L ++Y    + + +C+ Y+CR     F++    + C + SL+ L  T +L
Sbjct: 282 LLCIYYFYCALIILLCIYYFCR----AFIIFPTHFYC-AFSLYPLKSTFYL 327



 Score = 25.4 bits (53), Expect = 0.58
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -1

Query: 508 ILPLFY*LLKIFMFICLRY-YCRYFC----CIFVLAAKQYPCFSISLFGLTITSFL*YFF 344
           +L ++Y ++ +F  +C+ Y YC +       +F+L    + C  I +F + +     + F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI-IFTMHLLFCCAFIF 188

Query: 343 LKLYRSISLC-STTTLYLI 290
             ++    LC    TL+L+
Sbjct: 189 FNMHLLFLLCLDYFTLHLL 207


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 133 HYANDGG*ILFL*NTFSKRLVGSSGVYQSESNLK 32
           HY+ DGG +  L NT      G++  YQ+E+ L+
Sbjct: 394 HYSGDGGEVAHLPNTHMGHEPGAA-YYQNENMLQ 426


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 133 HYANDGG*ILFL*NTFSKRLVGSSGVYQSESNLK 32
           HY+ DGG +  L NT      G++  YQ+E+ L+
Sbjct: 342 HYSGDGGEVAHLPNTHMGHEPGAA-YYQNENMLQ 374


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 559 LVSSVSKVLRQRTKDTLHLLPCW 627
           L S + KVL ++ K +  L  CW
Sbjct: 212 LTSKIYKVLEEKYKTSGSLYTCW 234


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 304 TLYLILFVFL*FRTVD*SFSLLEYVD 227
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 304 TLYLILFVFL*FRTVD*SFSLLEYVD 227
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 469 FICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFL 341
           F+CL  +      I+ L ++    FS    GLTI + L  F L
Sbjct: 290 FLCLYLFLIITLTIYGLLSQLQAGFSTKDIGLTINAGLAIFIL 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,943
Number of Sequences: 336
Number of extensions: 3369
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)