Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_K03
(953 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 32 0.49
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 32 0.64
At1g67770.1 68414.m07733 RNA-binding protein, putative similar t... 32 0.64
At3g50130.1 68416.m05480 expressed protein ; expression supporte... 31 1.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.5
At3g24540.1 68416.m03082 protein kinase family protein contains ... 31 1.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.5
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 2.0
At1g61080.1 68414.m06877 proline-rich family protein 30 2.0
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 30 2.6
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 3.4
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 29 3.4
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 29 3.4
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 3.4
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 29 4.5
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 6.0
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 6.0
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 29 6.0
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 7.9
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 7.9
At4g14750.1 68417.m02270 calmodulin-binding family protein conta... 28 7.9
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 28 7.9
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 32.3 bits (70), Expect = 0.49
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP ++ + PPPPP
Sbjct: 619 PPPPPPTYYAVQSPPPPPP 637
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 581 FXSXPPPXXFFXXKKXPPPPP 643
+ S PPP ++ + PPPPP
Sbjct: 603 YTSSPPPPTYYATQSPPPPPP 623
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 618 PPPPPPPTYYAVQSPPPPP 636
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 661 PPPPPVYYSPVTQSPPPPP 679
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3
Query: 546 FFXXXXXPXXFFFXPPPPPXXFFXKKXXPPPPP 644
++ P + PPPP + + PPPPP
Sbjct: 592 YYPSPSPPYYQYTSSPPPPTYYATQSPPPPPPP 624
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 633 PPPPPVYYPPVTASPPPPP 651
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 647 PPPPPVYYTPVIQSPPPPP 665
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP ++ PPPP
Sbjct: 632 PPPPPPVYYPPVTASPPPP 650
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 31.9 bits (69), Expect = 0.64
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP ++ PPPPP
Sbjct: 30 PPPPPPPLMRRRAPPPPPP 48
Score = 31.9 bits (69), Expect = 0.64
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP ++ PPPPP
Sbjct: 43 PPPPPPPLMRRRAPPPPPP 61
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 31 PPPPPPLMRRRAPPPPPPPLMRRRAP 56
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 16 PPPPPPLMRRRAPLPPPPP 34
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 44 PPPPPPLMRRRAPPPPPPP 62
>At1g67770.1 68414.m07733 RNA-binding protein, putative similar to
terminal ear1 gb|AAC39463.1
Length = 527
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP +F PPPPP
Sbjct: 49 PPPPPPLYFSYFSLPPPPP 67
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP F PPPPP
Sbjct: 50 PPPPPLYFSYFSLPPPPPP 68
>At3g50130.1 68416.m05480 expressed protein ; expression supported
by MPSS
Length = 564
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP F PPPPP P
Sbjct: 11 PPPPPPPSFRSIPRPPPPPSFRSIPP 36
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 441 PPPPPPPVYSPPPPPPPPPPPPVYSP 466
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 487 PPPPPPPVYSPPPPPPPPPPPPVYSP 512
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPP 467
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 456 PPPPPPPVYSPPPPPPPPP 474
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 457 PPPPPPVYSPPPPPPPPPPPPPVYSP 482
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPP 498
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 488 PPPPPPVYSPPPPPPPPPPPPVYSPP 513
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPPXXXXXXP 665
P ++ PPPP ++ PPPPP P
Sbjct: 643 PPPVYYSSPPPPPVYY--SSPPPPPPVHYSSPP 673
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPP 644
P + PPPPP PPPPP
Sbjct: 433 PPVYSPPPPPPPPPPVYSPPPPPPPP 458
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPP 644
P F PPPPP PPPPP
Sbjct: 50 PEPLFSEPPPPPKAPVNVSLSPPPPP 75
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP K PPPPP P
Sbjct: 714 PPPPPPPPLSKTPAPPPPPLSKTPVP 739
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP K PPPPP
Sbjct: 644 PPPPPTRIPAAKCAPPPPP 662
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 591 PPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPP ++ PPPPP P
Sbjct: 702 PPPPAPYYYSSPQPPPPPHYSLPPP 726
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +3
Query: 519 PPXXXXXFFFFXXXXXPXXFFFXPPPPPXXFFXKKXXPPPPPXXXXXXP 665
PP + P ++ PPPPP + PPPPP P
Sbjct: 768 PPPPPSPAHYSPPPSPPVYYYNSPPPPPAVHY----SPPPPPVIHHSQP 812
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 522 PXXXXXFFFFXXXXXPXXFFFXPPPPPXXFFXKKXXPPPPPXXXXXXP 665
P +++ P + PPPPP + PPPPP P
Sbjct: 779 PPPSPPVYYYNSPPPPPAVHYSPPPPPVIHHSQ---PPPPPIYEGPLP 823
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 587 SXPPPXXFFXXKKXPPPPPXXXXXP 661
S PPP ++ PPPPP P
Sbjct: 701 SPPPPAPYYYSSPQPPPPPHYSLPP 725
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP K PPPPP
Sbjct: 460 PPPPPAVMPLKHFAPPPPP 478
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPP 644
P F PPP P F K PPPP
Sbjct: 486 PLKHFAPPPPTPPAFKPLKGSAPPPP 511
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP PPPPP P
Sbjct: 511 PPPPPLPTTIAAPPPPPPPPRAAVAP 536
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP PPPPP P
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPP 550
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP PPPPP P
Sbjct: 538 PPPPPPGTAAAPPPPPPPPGTQAAPP 563
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP PPPPP
Sbjct: 592 PPPPPMPLANGATPPPPPP 610
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP PPPPP
Sbjct: 607 PPPPPMAMANGAAGPPPPP 625
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPPXXXXXXP 665
P + + PPPPP + PPPPP P
Sbjct: 162 PPPYVYSPPPPPPYVYQS---PPPPPYVYSSPP 191
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP K PPPPP
Sbjct: 208 PPPPPQAARSYKRSPPPPP 226
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 194 PPPPPYKYGRVYPPPPPPP 212
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 27 PPPPPPPMRRRAPLPPPPP 45
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 41 PPPPPPPMRRRAPLPPPPP 59
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP PPPPP P
Sbjct: 12 PPPPPPRLLVLPPLPPPPPPPPPQLP 37
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 267 PPPPPPGSWQPSPPPPPPP 285
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP K PPPPP
Sbjct: 325 PPPPPPSPEHKAPAPPPPP 343
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 593 PPPXXFFXXKKXPPPPP 643
PPP F+ + PPPPP
Sbjct: 95 PPPPRFYYFESTPPPPP 111
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 400 PPPPPPPPYVYPSPPPPPP 418
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP + PPPPP
Sbjct: 245 PPPPPPIPVKQSATPPPPP 263
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP PPPPP
Sbjct: 246 PPPPPIPVKQSATPPPPPP 264
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPP 644
PPPPP PPPPP
Sbjct: 260 PPPPPPKLKNNGPSPPPPP 278
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP PPPPP P
Sbjct: 693 PPPPPMQHSTVTKVPPPPPPAPPAPP 718
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPPP + PPPPP P
Sbjct: 265 PPPPPAAAPPPQPPPPPPPKPQPPPP 290
>At4g14750.1 68417.m02270 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 387
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 591 PPPPXXFFXKKXXPPPPPXXXXXXP 665
PPPP K PPPPP P
Sbjct: 54 PPPPACAITLKDSPPPPPPPPPPPP 78
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 567 PXXFFFXPPPPPXXFFXKKXXPPPPPXXXXXXP 665
P F + PPPP + PPPPP P
Sbjct: 98 PPPFVYSSPPPPTYIYNS---PPPPPYVYKSVP 127
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,271,129
Number of Sequences: 28952
Number of extensions: 200542
Number of successful extensions: 2489
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2295205728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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