Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_K02
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   4.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   4.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   4.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
 Frame = +1

Query: 109  CACSPPARASLNYPRTLLTKT-SRRNCTTASSPATTT----VLSVRAWNMRAKARAPXXX 273
            C  S P   SLN    L+    SR +CT    P T         V       +   P   
Sbjct: 977  CGGSFPLLRSLNRGLGLIPDNPSREDCTKPPEPVTPAPPQVTTGVDTGASSTEHMHPDWT 1036

Query: 274  XXXXXXXXXXDGTPW-STATSCGSATDRKLLESTSH*TLDSSWP 402
                        +PW +T T+  + T R    ST+     ++WP
Sbjct: 1037 TKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/55 (21%), Positives = 21/55 (38%)
 Frame = +1

Query: 532 SSLPWWENNRVYFKIHNTKYHQYLKMSTTTCNCXSRXRVVYGGNSADSTRGANGS 696
           S+ PWWE  +    I NT+      ++     C +    +Y     +   G  G+
Sbjct: 70  SNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGGT 124


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/55 (21%), Positives = 21/55 (38%)
 Frame = +1

Query: 532 SSLPWWENNRVYFKIHNTKYHQYLKMSTTTCNCXSRXRVVYGGNSADSTRGANGS 696
           S+ PWWE  +    I NT+      ++     C +    +Y     +   G  G+
Sbjct: 71  SNRPWWERYQPVSYILNTRSGDETALADMISRCNAVGVRIYVDTVINHMTGMGGT 125


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/55 (21%), Positives = 21/55 (38%)
 Frame = +1

Query: 532 SSLPWWENNRVYFKIHNTKYHQYLKMSTTTCNCXSRXRVVYGGNSADSTRGANGS 696
           S+ PWWE  +    I NT+      ++     C +    +Y     +   G  G+
Sbjct: 71  SNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGGT 125


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 72  APNKMKLLVVFAMCMLAASA 131
           APN  +  VV+A C L A+A
Sbjct: 123 APNGHQTQVVYASCKLQAAA 142


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 376 GKYFLTISCPLPTHSL*QYSMVFRLL 299
           G  F T+   +P H+  +Y  VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 370 YFLTISCPLPTHSL*QYSMVFRL 302
           Y  TI+ PL    L  Y+M FR+
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRM 345


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -3

Query: 488 GXSLIXGIGCGTELQSEVVVSVNDLDIVSGHDESKV*WEVLSN 360
           G +++ GI   ++L++ ++ S        G+D   + WE  +N
Sbjct: 108 GNAILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPAN 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,798
Number of Sequences: 336
Number of extensions: 3438
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)