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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J23
         (871 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.043
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)                  36   0.057
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.40 
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)                   32   0.53 
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.53 
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)               32   0.53 
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)                  30   2.1  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)                       29   4.9  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)                 29   4.9  
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)                     28   8.6  

>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 21/64 (32%), Positives = 22/64 (34%)
 Frame = +1

Query: 673 GXGGXGXFSPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPX 852
           G  G G  +PPP  T   P         PP     P   P PPP P        P P P 
Sbjct: 337 GTSGGGGVNPPPPPTNNPPSPPPPTNNTPPP--PPPTNKPPPPPPP---TNGPPPPPPPT 391

Query: 853 XXPP 864
             PP
Sbjct: 392 NGPP 395



 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/56 (35%), Positives = 20/56 (35%)
 Frame = +1

Query: 697 SPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           SPPP    T P      K  PP     P   P PPP P        P P P   PP
Sbjct: 356 SPPPPTNNTPPPPPPTNKPPPPP---PPTNGPPPPPPP---TNGPPPPPPPTNGPP 405



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PP    P  PP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPP 399



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PP    P  PP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPPP 409


>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
          Length = 457

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 18/56 (32%), Positives = 19/56 (33%)
 Frame = +1

Query: 697 SPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           SPPP      P      +  PP     P   P PPP P        P P P   PP
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432



 Score = 35.1 bits (77), Expect = 0.075
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = +1

Query: 700 PPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PPP      P         PPS    P   P PPP P        P P P   PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421



 Score = 33.9 bits (74), Expect = 0.17
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = +1

Query: 700 PPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PPP      P         PP     P   P PPP P        P P P   PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425



 Score = 33.5 bits (73), Expect = 0.23
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = +1

Query: 700 PPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PPP      P         PP     P   P PPP P        P P P   PP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +3

Query: 777 SXXXPXXPPXPXXXPXXPXPPPXXXPXXPPR 869
           S   P  PP P   P  P PPP   P  PP+
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQ 394



 Score = 32.7 bits (71), Expect = 0.40
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = +1

Query: 697 SPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXP 861
           SPPP      P         PP     P   P PPP P        P P P   P
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418



 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/55 (29%), Positives = 17/55 (30%)
 Frame = +1

Query: 700 PPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PPP  +   P         PP     P   P PPP P        P   P   PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/61 (27%), Positives = 17/61 (27%)
 Frame = +1

Query: 682 GXGXFSPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXP 861
           G     PPP      P         PP     P   P PPP P        P P P    
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPA 419

Query: 862 P 864
           P
Sbjct: 420 P 420



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/55 (29%), Positives = 17/55 (30%)
 Frame = +1

Query: 700 PPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PPP    + P         PP     P   P PPP P        P P     PP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424


>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 16/54 (29%), Positives = 16/54 (29%)
 Frame = +1

Query: 703 PPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPP 864
           PP      P         PP     P   P PPP P        P P P   PP
Sbjct: 57  PPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 771 FXSXXXPXXPPXPXXXPXXPXPPPXXXPXXPP 866
           F S   P  PP P        PPP   P  PP
Sbjct: 45  FISSSPPPPPPSPPAAAPAAPPPPAAAPAAPP 76


>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
          Length = 593

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPP 490



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPP 491



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPPP 493



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPPPPPP 494



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 798 PPXPXXXPXXPXPPPXXXPXXPP 866
           PP P   P  P PPP   P  PP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPP 486


>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1324

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789  PXXPPXPXXXPXXPXPPPXXXPXXPP 866
            P  PP P   P  P PPP   P  PP
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPPPPP 1183



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789  PXXPPXPXXXPXXPXPPPXXXPXXPP 866
            P  PP P   P  P PPP   P   P
Sbjct: 1161 PPPPPPPPSSPSPPPPPPPPPPPPTP 1186


>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
          Length = 867

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPP 230



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPPR 869
           P  PP P   P  P PPP   P  PPR
Sbjct: 216 PPPPPPPSPSPPRPPPPP---PPSPPR 239



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 798 PPXPXXXPXXPXPPPXXXPXXPPR 869
           PP P   P  P PPP      PPR
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPR 228



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P P P   P  PP
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPP 234


>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1597

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 798 PPXPXXXPXXPXPPPXXXPXXPP 866
           PP P   P  P PPP   P  PP
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPP 707



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP      PP
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPP 708



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP      PP
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPPPP 709



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PP    P  PP
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPPPPP 710



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P P P   P  PP
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPPP 711



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P  PP   P  PP
Sbjct: 690 PPPPPPPPPPPPQPSTPPPPPPSTPP 715


>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
          Length = 99

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 168 ENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 296
           +NG D  DG+V   V      D D G N+ DG+  G   DGG+
Sbjct: 25  DNGDDGDDGDVDDNVCDGDGDDGDDGDNVCDGD--GDDGDGGD 65


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 798 PPXPXXXPXXPXPPPXXXPXXPP 866
           PP P   P  P PPP   P  PP
Sbjct: 97  PPYPPYPPPPPYPPPPNPPYPPP 119



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
 Frame = +1

Query: 694 FSPPPXXTXTXPXXXXXXKKXPPSFFFXPXXXPXP--PPXPXXXXXXXXPXPXPXXXPP 864
           + PPP      P         PP+  + P   P P  PP P        P P     PP
Sbjct: 148 YPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPP 206



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP     P  P PPP   P  PP
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPP 190



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  P  P   P  P PPP   P  PP
Sbjct: 90  PNPPYPPPPYPPYPPPPPYPPPPNPP 115



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 111 PPNPPYPPP-PNAPYPPPPNPPYPPP 135



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  P  P   P  P PPP   P  PP
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPP 177



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP     P  P PPP   P  PP
Sbjct: 173 PYPPPPYPPPPNPPYPPPPNPPYPPP 198



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP P   P  P PPP   P  PP
Sbjct: 190 PPNPPYPPP-PNAPNPPPPNPPYPPP 214


>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 757 PPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPPR 867
           PP F   P   P PPP P        P P P    P+
Sbjct: 292 PPPFGGHPAAAPPPPPLPAGVPAPPPPPPPPMLGGPK 328


>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXP 863
           P  PP P   P  P PPP   P  P
Sbjct: 54  PPPPPPPPPPPPPPPPPPSSSPSRP 78


>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 291

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 868 RGGXXGXXXGGGXGXXGXXXGXGGXXG 788
           RGG  G   GGG G  G   G GG  G
Sbjct: 102 RGGGGGYGGGGGYGGGGRSYGGGGGGG 128


>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 335

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 144 AIVAVNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 296
           A VA ++  + GD+ DG    G D     D+D G +    + GG   DGG+
Sbjct: 185 ADVASSAVADNGDNDDGSDDDGGDNDDGSDDDDGGDDGSDDDGGDNDDGGD 235


>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
          Length = 315

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 757 PPSFFFXPXXXPXPPPXPXXXXXXXXPXPXPXXXPPR 867
           PP  F        PPP P        P P P   PPR
Sbjct: 168 PPPIFPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPR 204


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  P  P   P  P PPP   P  PP
Sbjct: 903 PTTPAPPPPLPLAPEPPPPLPPPPPP 928


>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
          Length = 507

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -3

Query: 869 PRGGXXXGXGXGXXXXWXXXGXGGGXGXXXGXKKKEGG 756
           PRGG   G G G        G GGG G   G   +  G
Sbjct: 335 PRGGSGRGGGGGGGGGGGGGGGGGGRGGGGGFSSRGRG 372


>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPPXXXPXXPP 866
           P  PP     P  P PPP   P  PP
Sbjct: 93  PACPPACCAPPPPPPPPPPPPPPPPP 118



 Score = 25.8 bits (54), Expect(2) = 5.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 789 PXXPPXPXXXPXXPXPPP 842
           P  PP P   P  P PPP
Sbjct: 103 PPPPPPPPPPPPPPPPPP 120



 Score = 21.4 bits (43), Expect(2) = 5.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 828 PXPPPXXXPXXPP 866
           P PPP   P  PP
Sbjct: 140 PPPPPPPAPCMPP 152


>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
          Length = 654

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 168 ENGGDSPDGEVA--PGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 296
           + GGD  DG+     GVD   V D+  G +   G+ GG   DGG+
Sbjct: 3   DGGGDGDDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGGDDDGGD 47


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,005,128
Number of Sequences: 59808
Number of extensions: 275114
Number of successful extensions: 1949
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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