BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J23
(871 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY994091-1|AAX86004.1| 83|Anopheles gambiae hyp6.3 precursor p... 28 0.32
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 25 3.0
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 25 3.0
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 5.2
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 9.2
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 9.2
>AY994091-1|AAX86004.1| 83|Anopheles gambiae hyp6.3 precursor
protein.
Length = 83
Score = 28.3 bits (60), Expect = 0.32
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 105 MKFTVAFALIAMFAIVAVN 161
MKF AF LIA+FA+ AV+
Sbjct: 1 MKFAFAFVLIALFAVFAVS 19
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -1
Query: 868 RGGXXGXXXGGGXGXXGXXXG--XGGXXGXXXEXKKKR 761
+GG G GGG G G G GG G + KR
Sbjct: 552 KGGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSRRIKR 589
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -1
Query: 868 RGGXXGXXXGGGXGXXGXXXG--XGGXXGXXXEXKKKR 761
+GG G GGG G G G GG G + KR
Sbjct: 553 KGGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSRRIKR 590
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 24.2 bits (50), Expect = 5.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 863 GGXXXGXGXGXXXXWXXXGXGGGXGXXXGXKKKEGGXFF 747
GG G G G G GGG G G ++GG F
Sbjct: 58 GGGDDGYGGGGRGG--RGGRGGGRGRGRGRGGRDGGGGF 94
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 195 EVAPGVDPVKVVDEDHGVNIVDGEPGGQY 281
++ P + V + +G+ I+ PGGQY
Sbjct: 452 QLQPALVAVGIAIVGYGIGIIYTTPGGQY 480
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 195 EVAPGVDPVKVVDEDHGVNIVDGEPGGQY 281
++ P + V + +G+ I+ PGGQY
Sbjct: 452 QLQPALVAVGIAIVGYGIGIIYTTPGGQY 480
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,396
Number of Sequences: 2352
Number of extensions: 8178
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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