Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J22
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 55 8e-08
11_02_0011 - 7337618-7338496,7338596-7338991 41 0.001
11_01_0750 - 6315126-6315896,6316371-6316784 39 0.006
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.008
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 38 0.008
03_05_0294 + 22855503-22855946,22856346-22856399 34 0.13
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 31 1.6
07_01_0032 + 258788-259201,259297-259462,260938-261443 30 2.8
06_01_0059 - 510856-511499,511595-511805 29 4.8
11_01_0771 + 6453130-6454488 28 8.4
11_01_0703 - 5785599-5785607,5785954-5786008,5786572-5786627,578... 28 8.4
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 8.4
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 54.8 bits (126), Expect = 8e-08
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Frame = +1
Query: 235 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYGLLNQRYAEFDP 408
DKN+ SPL + L+L +GA ++ ++I LG GG A + ++ L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 409 ------KFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWAD 564
+ AN ++V +L A++R A+ +R+E ++F + A IN W +
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 565 EQTQGHIKTPVSEDKIDPATAVAMFNVIFXPG 660
T G IK + +D +D AT + N ++ G
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKG 182
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Frame = +1
Query: 226 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTH---TYGLLNQ 387
++ +KN++ SP + L+L +GA + +E+ +LG + +ES GL ++
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 388 RYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFS-APKNAADIINRWA 561
A P+ ++ A ++ + +L A+ + A +++ NF PK + IN+W
Sbjct: 87 S-ASGGPR-VSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 562 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFXPG 660
+ T I + + + TA+ + N I+ G
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKG 177
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 38.7 bits (86), Expect = 0.006
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 12/152 (7%)
Frame = +1
Query: 241 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG------GGEAQE----STHTYGLLNQR 390
N S V + L+L GA ++ ++ + LG GG A S +L R
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 391 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADIINRWAD 564
P+ L A ++ L+ F A N++ S +F + P++A D IN W
Sbjct: 93 STSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVK 151
Query: 565 EQTQGHIKTPVSEDKIDPATAVAMFNVIFXPG 660
+ T+G + T + ID T + + + ++ G
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 38.3 bits (85), Expect = 0.008
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 208 LKESYNLADD-----KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQEST 363
L+ + LADD +NV+ SP+ + L+L SGA + +E+ +LG + +ES
Sbjct: 16 LRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESV 75
Query: 364 HT---YGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKN 534
GL ++ +E ++ A ++ ++ L A+ R A+ R PK+
Sbjct: 76 RRAVEVGLADE--SESGGPRVSYACGVWHDERLALKPAY-RAADFQRQ---------PKS 123
Query: 535 AADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFXPG 660
+ IN+W + T I+ + + + TA+ + N I+ G
Sbjct: 124 SRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKG 165
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 38.3 bits (85), Expect = 0.008
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Frame = +1
Query: 238 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYG------LLNQRYAE 399
+NV SPL + + LSL +GAG +++++ LGG + E H + +L
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 400 FDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-----PKNAADI 546
P+ + A+ ++V L F A +++E +++F P N A+I
Sbjct: 95 GGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQTKWLLLPSNLANI 148
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 229 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYG--LLNQRYA 396
A NV SPL + + LSL +GAG +++++ +LG G E H + ++ A
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLA 100
Query: 397 EFDP---KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF 519
+ P + A+ +++ L +F A +++E +++F
Sbjct: 101 DSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 358 TLEPPLPQGFPLSLPWTVHRLQTRTRKAAAS 266
+L PPLP G PLS P+ QT + A S
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEKAAPLS 781
>07_01_0032 + 258788-259201,259297-259462,260938-261443
Length = 361
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 686 CVERNVPVPPGKKMTLNIATAVAGSILSSLTGVFM 582
C N P PP +AT++AGS+L L GV +
Sbjct: 324 CSAVNPPSPPSSAAASMLATSLAGSLLFLLAGVLV 358
>06_01_0059 - 510856-511499,511595-511805
Length = 284
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 268 MLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFD-PKFLTVANKIYVS 444
+LL + GAG S ++ GGG ++ H +G+ Q +A D LTV Y +
Sbjct: 197 LLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYST 256
Query: 445 DQYKL--ADAFS 474
Q + +DA S
Sbjct: 257 PQQTIIVSDAIS 268
>11_01_0771 + 6453130-6454488
Length = 452
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 238 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE 357
+N+ SPL V LSL +GA + +EI +LG +
Sbjct: 37 RNLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDD 76
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 657 RGHWHVPFNASETEEKDFH 713
+G W PFN S+TE K F+
Sbjct: 213 KGKWDRPFNESDTERKPFY 231
>11_01_0703 -
5785599-5785607,5785954-5786008,5786572-5786627,
5786750-5786923,5787509-5787694,5787892-5788048,
5788144-5788372,5788909-5789167,5789453-5789554
Length = 408
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 580 HIKTPVSEDKIDP-ATAVAMFNVIFXPGGTGTFRSTQVKQKK 702
+I+ +K+D + V M +I PG TG FRST++ ++
Sbjct: 204 YIERKEISNKLDIFSLGVVMLEIIAGPGPTGHFRSTEIPSQE 245
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 329 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 508
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 509 TLTSALRRMPLISSTVGRTN 568
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,602,533
Number of Sequences: 37544
Number of extensions: 536730
Number of successful extensions: 1473
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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