Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J22
         (866 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      48   1e-05
SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      48   1e-05
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)                       29   3.7  
SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_48668| Best HMM Match : WXG100 (HMM E-Value=2.8)                    29   6.5  
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)                       29   6.5  
SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)                      28   8.6  
SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.6  

>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
 Frame = +1

Query: 271 LLLSLYESGAGAQSKEEIREILGGGEAQ-ESTH-TYGLLNQRYAEFDPKF--LTVANKIY 438
           + L L   G+   +  +I  I G  E++ E TH T+   ++     D  +  + + NKI+
Sbjct: 3   MALGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIW 62

Query: 439 VSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDKI 612
             D++++ + F   T   + SE+  ++F +   +A   +N W  +QT+G+IK  +    I
Sbjct: 63  GHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVI 122

Query: 613 DPATAVAMFNVIFXPG 660
           +  T + + N ++  G
Sbjct: 123 NSLTRLIIVNAVYFKG 138


>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 32/167 (19%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
 Frame = +1

Query: 241 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG-GGEAQESTHTYGLLNQRYAEFDPKFL 417
           N+  SP  +++ L++   GA   +  ++ +      +  E  H + L     +  D   +
Sbjct: 29  NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDF-LQALNASNSDGNQI 87

Query: 418 TVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAPKNAA-DIINRWADEQTQGHIKT 591
            +AN+++    +++ + F + +   F +E+  +++    N A D +NRW +++T+  IK 
Sbjct: 88  LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147

Query: 592 PVSEDKIDPATAVAMFNVIFXPGGTGTFRSTQVKQKKKISTXDEKTI 732
            + E   +  T + + N ++  G      +    Q  K  T   + I
Sbjct: 148 LIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEI 194



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 657 RGHWHVPFNASETEEKDFHXR*KNDHQETDNASLTVIVYTENEELGAKMIELPY 818
           +G W   FN + T+   F      + Q       +   Y E+  LG +++ELPY
Sbjct: 169 KGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESSTLGCQIVELPY 222


>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1044

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 678 FNASETEEKDFHXR*KNDHQETDNASLTVIVYTENEELGAKMIELPYKE 824
           FN ++ EE   H R   D +  + ASL  +V  + EE   K I   YKE
Sbjct: 230 FNMADAEESIQHLRCYTDPENAEKASLKTVVLVDEEERPMKGI-AGYKE 277


>SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1273

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 648 NDVKHCNGRGGVNFVFADRSLYVSLSLFVRPTVDDISGILRSAE 517
           +D ++CN   GVN V  +   +  L +F   T  D+S + R  E
Sbjct: 444 DDKQYCNNSHGVNIVVLEMLTFKVLHVFSYETSRDLSAVCRMVE 487


>SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 84

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 428 IKYTFPTSISWPTRSPEQRICSEAKWTTLTSALRRMPL 541
           + ++FP    WP+    QR+ S   W ++ +  RR PL
Sbjct: 40  VYWSFPQLDPWPSVLAFQRVASHHSWPSVLACQRRGPL 77


>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
          Length = 354

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 240 ECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGR 344
           E DSV + +D+ A     W+R  +  + K NPW R
Sbjct: 262 EKDSVDTEKDSVATEKNPWTRRKIPWQRKKNPWTR 296


>SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1198

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 502  VDNINFSAPKNAADI--INRWADEQ-TQGHIKTPVSEDKIDPATAVAMFN 642
            V  ++   PK +A I  + +W   Q   GH +TP S D + P    A+ N
Sbjct: 1072 VTALHAKLPKGSASIDRVRKWVSSQPVGGHTQTPPSYDYLRPLLGAALVN 1121


>SB_48668| Best HMM Match : WXG100 (HMM E-Value=2.8)
          Length = 214

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +1

Query: 694 QKKKISTXDEKTIIKKPTMRLLQSLFTLKTKNWAQR*SSYRIRSQDS 834
           QK+KIS   E+ II+K   RLL+ L ++   ++  R    +I  QDS
Sbjct: 110 QKEKISFEKERMIIEKERTRLLRELGSITNFDYFSR----KIEDQDS 152


>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
          Length = 768

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = -2

Query: 430 YWRQSRISGRILRNADLIIRMCVLTLEPPLPQGFPLSLPWTVHRLQTRTRKAAASRREET 251
           Y    R+S ++   A    R C+L+L   +  G   S  W VH++ T  +K     R++ 
Sbjct: 78  YGLDGRVSDKVF-TATCRARFCLLSLGFTIGFGAMFSKTWRVHQIFTNVKKVKKVVRDKD 136

Query: 250 L 248
           L
Sbjct: 137 L 137


>SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)
          Length = 764

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -3

Query: 591 SLYVSLSLFVRPTVDDIS--GILRSAEVNVVHFASEQIRCSGERVGQLILVGN 439
           SLY  L L + P  +D S   I +S ++ V++   E+I C+GERV   +LV N
Sbjct: 538 SLYDGL-LKLFPECNDASELSIAQSGKLTVLNSMLEEIHCTGERV---VLVSN 586


>SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 312 QGRDKGNPWGRGGSRVNTHIRIIKSALRRIRP 407
           QGR K N   +G +R N  +R + +  RR+RP
Sbjct: 7   QGRTKENKGEQGRTRENKELREVHADSRRLRP 38


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,148,562
Number of Sequences: 59808
Number of extensions: 613278
Number of successful extensions: 2444
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)