Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J22
         (866 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    55   5e-08
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    41   0.001
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont...    29   5.3  
At3g60860.1 68416.m06808 guanine nucleotide exchange family prot...    28   7.0  
At1g13540.1 68414.m01587 expressed protein                             28   7.0  
At3g62590.1 68416.m07031 lipase class 3 family protein contains ...    28   9.3  
At2g37960.1 68415.m04659 expressed protein                             28   9.3  

>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
 Frame = +1

Query: 223 NLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEF 402
           ++A+  NV+ SP+ + +LLSL  +G+   +KEEI   L              +     E 
Sbjct: 25  DVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTER 84

Query: 403 DPKFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINFSA-PKNAADIINRWADEQTQ 576
               L+ A+ +++     L  +F     N +++    ++F+  P    D +N WAD  T 
Sbjct: 85  SDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTN 144

Query: 577 GHIKTPVSEDKID 615
           G IK  +S D  D
Sbjct: 145 GLIKQILSRDCTD 157


>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
 Frame = +1

Query: 226 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIRE--ILGGGEAQES--THTYGLLNQRY 393
           +A+  N++ SP+ + +LL L  +G+   +KE+I    +L   +   +    T  +     
Sbjct: 25  VANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALNDG 84

Query: 394 AEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWADE 567
            E     L+ A  +++        +F     N + +  + ++F+  P    + +N WA+ 
Sbjct: 85  MERSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEV 144

Query: 568 QTQGHIKTPVSEDKIDP--ATAVAMFNVIFXPGGTGTFRSTQVKQKKKISTXDEKTIIKK 741
            T G IK  +S+D I     + + + N ++  G        ++ +       D  T++K 
Sbjct: 145 HTNGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLD-GTMVKV 203

Query: 742 PTM 750
           P M
Sbjct: 204 PFM 206


>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
           contains Pfam domain PF00098: Zinc knuckle; identical to
           cDNA CAX-interacting protein 4 GI:27651998
          Length = 332

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = +2

Query: 698 RKRFPRSMKKRSSRNRQCVSYSHCLH*KRRIGRKDDR 808
           RKR  RSMKKRSS  R+ +S S      R   RK+ R
Sbjct: 198 RKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERR 234


>At3g60860.1 68416.m06808 guanine nucleotide exchange family protein
           similar to guanine nucleotide exchange factor, Homo
           sapiens, GI:5456754; contains Pfam profile PF01369: Sec7
           domain
          Length = 1793

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +1

Query: 301 GAQSKEEIREILGG----GEAQESTHTYGLLNQRYAEFDPKFLTVANKIYV 441
           G +  E IR  L G    GEAQ+         +RY + +PK  T A+  YV
Sbjct: 693 GMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYV 743


>At1g13540.1 68414.m01587 expressed protein 
          Length = 381

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 723 KNDHQETDNASLTVIVYTENEELGAKMIELPYKEPGFVW 839
           +ND  E  +  + V V TE  +L  +MIE   +  GFVW
Sbjct: 254 ENDKSENRDVVVDVEVETEVVKLEGQMIERGLEANGFVW 292


>At3g62590.1 68416.m07031 lipase class 3 family protein contains
           Pfam profile PF01764: Lipase
          Length = 649

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = -3

Query: 636 HCNGRGGVN-FV-FADRSLYVSLSLFVRPTVDDISGILRSAEVNVVHFASEQIRCSGERV 463
           H N RG    F+ F+  SL  SLSL V   +     +  S+ + V+ F S  I C G+R+
Sbjct: 368 HLNSRGKNRAFLRFSGHSLGGSLSLLVNLMLLIRGQVPASSLLPVITFGSPCIMCGGDRL 427

Query: 462 GQLILVGNVYFIGDS 418
            Q + +   + +G S
Sbjct: 428 LQKLGLPKSHLLGIS 442


>At2g37960.1 68415.m04659 expressed protein
          Length = 480

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +1

Query: 436 YVSDQYKLADAFSRTANLFRSEVDNINFSAP 528
           ++ D+Y   + FS+T +LFRSE  ++  ++P
Sbjct: 26  FLVDRYLCDNRFSKTRSLFRSEASSLISNSP 56


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,408,248
Number of Sequences: 28952
Number of extensions: 411408
Number of successful extensions: 1221
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)