Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J21
(884 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 36 0.027
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 36 0.047
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 35 0.083
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 35 0.083
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 33 0.33
At4g30090.1 68417.m04279 expressed protein 32 0.44
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 32 0.44
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 32 0.44
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 32 0.44
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 32 0.44
At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88... 32 0.58
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 31 0.77
At4g10670.1 68417.m01743 transcription elongation factor-related... 31 0.77
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 31 0.77
At1g08600.1 68414.m00953 SNF2 domain-containing protein / helica... 31 0.77
At4g25800.1 68417.m03712 calmodulin-binding protein similar to c... 31 1.0
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 1.0
At1g03080.1 68414.m00282 kinase interacting family protein simil... 31 1.0
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 31 1.3
At4g02710.1 68417.m00366 kinase interacting family protein simil... 30 1.8
At3g27260.1 68416.m03407 DNA-binding bromodomain-containing prot... 30 1.8
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 30 2.3
At5g64910.1 68418.m08165 expressed protein ; expression support... 29 3.1
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 3.1
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)... 29 3.1
At2g18570.1 68415.m02163 UDP-glucoronosyl/UDP-glucosyl transfera... 29 4.1
At1g67230.1 68414.m07652 expressed protein 29 4.1
At5g54090.1 68418.m06734 DNA mismatch repair MutS family protein... 29 5.4
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 29 5.4
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 5.4
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi... 29 5.4
At3g61710.2 68416.m06916 autophagy protein Apg6 family contains ... 29 5.4
At3g61710.1 68416.m06915 autophagy protein Apg6 family contains ... 29 5.4
At3g58270.1 68416.m06496 meprin and TRAF homology domain-contain... 29 5.4
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 29 5.4
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 29 5.4
At1g08780.1 68414.m00977 prefoldin, putative similar to Swiss-Pr... 29 5.4
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 29 5.4
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 28 7.2
At4g33620.1 68417.m04775 Ulp1 protease family protein low simila... 28 7.2
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 28 7.2
At2g22795.1 68415.m02704 expressed protein 28 7.2
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 9.5
At3g02930.1 68416.m00288 expressed protein ; expression support... 28 9.5
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 28 9.5
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 36.3 bits (80), Expect = 0.027
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +1
Query: 208 SRLEDKIRLIQDDLESERELRQRIEREKAD-LSVQVIQLSE---RLEEAEGGAESQFEIN 375
+ LE +++ + E ER++++R ERE+ + + +V++ +E +L+EA E++ +
Sbjct: 760 AELEQRLKATLEQEEKERQIKERQEREENERRAKEVLEQAENERKLKEALEQKENERRLK 819
Query: 376 RKRDTELLKLRKLLEDVHLESEE 444
R+ E K +KL E + LE +E
Sbjct: 820 ETREKEENK-KKLREAIELEEKE 841
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +1
Query: 205 LSRLEDKIRLIQDDLESERELRQRIEREKAD------LSVQVIQLSERLEEAEGGAESQF 366
L R+E++ R+ + L E + R+R+ EKA+ +++ + +++EA AE++
Sbjct: 629 LKRMEEETRIKEARLREENDRRERVAVEKAENEKRLKAALEQEEKERKIKEAREKAENER 688
Query: 367 EINRKRDTELLKLRKLLEDVHLE 435
R+ + + RK+ E LE
Sbjct: 689 RAVEARE-KAEQERKMKEQQELE 710
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 35.5 bits (78), Expect = 0.047
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 181 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAES 360
E A A ++LE ++ + LE E+++R +E+ K Q E L A +
Sbjct: 899 ETGALQDAKTKLEKEVEELTSCLELEKQMRMELEQVKT-------QEVEDLRSALNDMKL 951
Query: 361 QF-EINRKRDTELLKLRKLLEDVHLESEETAXLLK 462
Q E + E+LKL+ L+D+ LE EE A L+
Sbjct: 952 QLGETQVTKSEEILKLQSALQDMQLEFEELAKELE 986
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 34.7 bits (76), Expect = 0.083
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Frame = +1
Query: 172 VNIEYSADLSALSRLEDKIRLIQDDLESERELRQ-RIEREKADLSVQVIQLSERLE---- 336
V ++ S L + +++ ++ I+ + E E+ Q R E+EK L ++V +L +LE
Sbjct: 748 VAVDNSKRLLSENKILEQNLNIEKKKKEEVEIHQKRYEQEKKVLKLRVSELENKLEVLAQ 807
Query: 337 ---EAEGGAESQFE---INRKRDTELLKLRKLLEDVHLESEETAXLLK 462
AE ES+ + + EL +LR++ ED+ ++E+TA +LK
Sbjct: 808 DLDSAESTIESKNSDMLLLQNNLKELEELREMKEDIDRKNEQTAAILK 855
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 34.7 bits (76), Expect = 0.083
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Frame = +1
Query: 172 VNIEYSADLSALSRLEDKIRLIQDDLESERELRQ-RIEREKADLSVQVIQLSERLE---- 336
V ++ S L + +++ ++ I+ + E E+ Q R E+EK L ++V +L +LE
Sbjct: 747 VAVDNSKRLLSENKILEQNLNIEKKKKEEVEIHQKRYEQEKKVLKLRVSELENKLEVLAQ 806
Query: 337 ---EAEGGAESQFE---INRKRDTELLKLRKLLEDVHLESEETAXLLK 462
AE ES+ + + EL +LR++ ED+ ++E+TA +LK
Sbjct: 807 DLDSAESTIESKNSDMLLLQNNLKELEELREMKEDIDRKNEQTAAILK 854
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 181 EYSADLSALSRLED---KIRLIQDDL-ESERELRQRIEREKADLSVQVIQLSERLEEAEG 348
EY A+L A R +D K R +D L E ERELR+R ERE + V+ ++ R +EA
Sbjct: 547 EYIAELKAAQRGDDHEMKARDEEDKLRERERELRKRKEREVQE--VERVRQKIRRKEASS 604
Query: 349 GAESQFEINRKRDTE 393
++ + + RD E
Sbjct: 605 SYQALL-VEKIRDPE 618
>At4g30090.1 68417.m04279 expressed protein
Length = 312
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/77 (25%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +1
Query: 214 LEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTE 393
L+ ++ ++ ++E++R+ R +E E AD +V QLS +LE +G S+ +N
Sbjct: 112 LQKQVFGLKREVETQRKRRLEVEAELADK--KVAQLSSKLENIDGWFLSKLGLNPTESQV 169
Query: 394 LLKLRKLLE--DVHLES 438
+K+ ++ + + H+E+
Sbjct: 170 SMKIEQVQKWSEPHIET 186
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 DLESE-RELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLE 420
+LES +L++ +++ K +L+ E EEAE +IN D+ + +LRKL +
Sbjct: 73 ELESTISQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQ 132
Query: 421 D 423
+
Sbjct: 133 E 133
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 DLESE-RELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLE 420
+LES +L++ +++ K +L+ E EEAE +IN D+ + +LRKL +
Sbjct: 73 ELESTISQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQ 132
Query: 421 D 423
+
Sbjct: 133 E 133
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 DLESE-RELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLE 420
+LES +L++ +++ K +L+ E EEAE +IN D+ + +LRKL +
Sbjct: 75 ELESTISQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQ 134
Query: 421 D 423
+
Sbjct: 135 E 135
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 32.3 bits (70), Expect = 0.44
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 160 GTTDVNIEYSA-DLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLE 336
G N E A + S+L ++++ + L Q LE E E QR+ +E +L Q ++++E
Sbjct: 1056 GVFHENEELKAKEASSLKKIDELLHLEQSWLEKESEF-QRVTQENLELKTQDALAAKKIE 1114
Query: 337 EAEGGAESQFEINRKRDTEL 396
E ES E ++TEL
Sbjct: 1115 ELSKLKESLLE----KETEL 1130
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +1
Query: 208 SRLEDKIRLIQDDLESERELRQRIEREKA----DLSVQ---VIQLSERLEE---AEGGAE 357
+ L+ ++ IQ+DL+ E + ++++KA DL V + +E+L+E A+ AE
Sbjct: 54 TELQTQLNQIQEDLKKADEQIELLKKDKAKAIDDLKESEKLVEEANEKLKEALAAQKRAE 113
Query: 358 SQFEINRKRDTEL 396
FE+ + R EL
Sbjct: 114 ESFEVEKFRAVEL 126
>At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88874
Cyclin K (Fragment) {Mus musculus}; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 474
Score = 31.9 bits (69), Expect = 0.58
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +1
Query: 118 MAKTSKYTYRSSGGGTTDVNIEYSADLSAL--SRLEDKIRLIQDDLESERELRQ----RI 279
MA T K GG++ VN+ S D S SR E I + + E+++ L+ I
Sbjct: 305 MASTEKCPSSDIEGGSSQVNLSQSDDHSVHDGSRSEG-IGEVNSESEAQKNLQDHSVGNI 363
Query: 280 EREKADLSVQVIQLSERLEEAEGGAESQFEINRKR-DTELLKLRKLLEDVHLESE 441
EK+D V V+QL + L+ + ES+ E ++K + ++ K+ + E ESE
Sbjct: 364 MVEKSD-DVGVVQLKKDLQLHQEEVESKQEKDKKSFEKDITKIDLMDEKDLTESE 417
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 109 MSAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIERE 288
+S+ +K S+ +GGG D E R DK+R D ES+RE R ER+
Sbjct: 54 VSSRSKKSRGDGEENGGGKRDRERERHRSSRDKDRERDKVREGSRDKESDRE-RSSKERD 112
Query: 289 KAD 297
++D
Sbjct: 113 RSD 115
>At4g10670.1 68417.m01743 transcription elongation factor-related
low similarity to chromatin-specific transcription
elongation factor FACT 140 kDa subunit [Homo sapiens]
GI:5499741
Length = 470
Score = 31.5 bits (68), Expect = 0.77
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 148 SSGGGTTDVNIEYS-ADLSALSRLEDKIRLIQ-DDLESERELRQRIEREKADLSVQVIQL 321
S GG+ D + Y +D+ S ED+ + DD E E + Q E EK ++ +
Sbjct: 357 SESGGSEDSDKGYEPSDVEVESESEDETSESESDDEEEEEDSEQESEEEKGKTWAELERE 416
Query: 322 SERLEEAEGGAESQFEINRKR 384
+ + E G ES E RKR
Sbjct: 417 ATNADR-EHGVESDSEEERKR 436
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 262 ELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLED 423
+L++ +++ K LS E ++AE + EIN D+ + +LRKL ++
Sbjct: 85 QLQEELKKAKEQLSASEALKKEAQDQAEETKQQLMEINASEDSRIDELRKLSQE 138
>At1g08600.1 68414.m00953 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P46100
Transcriptional regulator ATRX {Homo sapiens}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain;
non-consensus GC donor splice site at exon boundary
28614
Length = 1457
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 148 SSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKA 294
SS + D + + + +S+ + + KIR I DD E ++ R +I EKA
Sbjct: 574 SSDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKDTRTKIAIEKA 622
>At4g25800.1 68417.m03712 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 601
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +1
Query: 145 RSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLS 324
+SS GG D I+ SAD L+ ED L ++D SE E+RQ A+ +Q + S
Sbjct: 470 QSSTGGYQD--IKSSADQENLNPFEDWTNLSENDFFSEEEIRQTSHDLLANEDMQQLLFS 527
Query: 325 ERLEEAEGG 351
+ E G
Sbjct: 528 MGGGKGEDG 536
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 208 SRLEDKIRLIQDDLESEREL-RQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKR 384
+R ++ R ++++ RE RQR ERE+ + ++ Q +R EE A+ + + +K+
Sbjct: 562 ARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEM---AKRREQERQKK 618
Query: 385 DTELLKLRKLLEDVHLESEETAXL 456
+ E ++ +K E+ EE A +
Sbjct: 619 EREEMERKKREEEARKREEEMAKI 642
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Frame = +1
Query: 169 DVNIEYSADLSALSRLEDKIRLIQDD---LESERE--------LRQRI---EREKADLSV 306
+ N+E S L LE+ L+ DD L SERE +R+RI E+E A+L V
Sbjct: 745 NANVELEELKSKLKSLEESCHLLNDDKTTLTSERESLLSHIDTMRKRIEDLEKEHAELKV 804
Query: 307 QVIQLSERLEEA 342
+V++L+ E +
Sbjct: 805 KVLELATERESS 816
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +1
Query: 220 DKIRLIQDDLESERELRQRIEREKADLSVQV-IQLSERLEEAEGGAESQFEINRKRDTEL 396
+ IR +++D + L +R+E+EK +L VQ+ +L R E ES F++ KR E
Sbjct: 325 EDIRRVKNDWDL---LLKRLEKEKTELQVQLETELDRRSSEWTSKVES-FKVEEKRLRE- 379
Query: 397 LKLRKLLE-DVHLESE 441
++R+L E +V L+ E
Sbjct: 380 -RVRELAEHNVSLQRE 394
>At4g02710.1 68417.m00366 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 199 SALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQ-LSERLEEAEGGAESQFEIN 375
S L +LE+ +++ +DL+S+ E +E+EK + + + +LEE E E F +N
Sbjct: 957 SDLQKLEN-LQITVEDLKSKVET---VEKEKTKVGENEYKTIKGQLEEGEEAIEKLFTVN 1012
Query: 376 RKRDTE 393
RK T+
Sbjct: 1013 RKLTTK 1018
>At3g27260.1 68416.m03407 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 813
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 247 LESERE---LRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLL 417
L ERE L+++ E+ + + + + R EAE AE+ E RKR+ E R+ L
Sbjct: 568 LRKEREELVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQAL 627
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +1
Query: 199 SALSRLEDKIRLIQD---DLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFE 369
SA + E+ R++ + DL ++ + +ER AD ++ QLSE + E AE+Q
Sbjct: 2302 SARNADEEMKRILDEKHMDLAQAKKHIEALERNTADQKTEITQLSEHISELNLHAEAQAS 2361
Query: 370 INRKRDTELLKLRKLLE-DVHLESEETAXLLK 462
+ EL + + ++ ++H+ + L K
Sbjct: 2362 EYMHKFKELEAMAEQVKPEIHVSQAIDSSLSK 2393
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/47 (27%), Positives = 30/47 (63%)
Frame = +1
Query: 238 QDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINR 378
++D E E+E R ++E+ + +V+ + + + EEA+G + S+ ++ R
Sbjct: 97 KEDKEEEKEEAAREDKEEEEEAVKPDESASQKEEAKGASSSEPQLRR 143
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +1
Query: 175 NIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGA 354
N + ++ + +EDK + ++ ++ + ++ QR+ E D + + + +++
Sbjct: 244 NQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQKKLLKEQKDAIDKFSEDQ 303
Query: 355 E--SQFEINRKRDTELL--KLRKLLEDVHLESEETAXLL 459
+ ++ K +T LL K+ +L ED ++ E+ +L
Sbjct: 304 KLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMEDHIRIL 342
>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 223 KIRLIQDDLESERELRQRIEREKADLSVQVIQLSER--LEEAEGGAESQFEINRKRDTE 393
++R ++ LESE+ RQR + E+ + ++ ++ ++ +E+ EG Q + +RD E
Sbjct: 278 RLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQL-VGLRRDAE 335
>At2g18570.1 68415.m02163 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 470
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 199 SALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQL-SERLEEAEGGAESQFEIN 375
SAL L + +I L +E+ + + E+ ++V+ +L SER+ E A +I
Sbjct: 365 SALESLTKGVPIIAWPLYAEQWMNATLLTEEIGVAVRTSELPSERVIGREEVASLVRKIM 424
Query: 376 RKRDTELLKLRKLLEDVHLESE 441
+ D E K+R E+V + SE
Sbjct: 425 AEEDEEGQKIRAKAEEVRVSSE 446
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 181 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAES 360
E +LS ++ L D R D+++ER QRIE+EK ++ L E+ E +
Sbjct: 643 EREKELSNINYLRDVARREMMDMQNER---QRIEKEKLEVDSSKNHLEEQQTEIRKDVDD 699
Query: 361 QFEINRK 381
+ +K
Sbjct: 700 LVALTKK 706
>At5g54090.1 68418.m06734 DNA mismatch repair MutS family protein
low similarity to SP|Q56239 DNA mismatch repair protein
mutS {Thermus aquaticus; contains Pfam profile PF00488:
MutS domain V
Length = 795
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 235 IQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKL 414
+ DDL+S R + E E + + I A GGA + + + E L +
Sbjct: 304 MNDDLQSARASVAKAEAEILSMLTEKINARATYSRAYGGAHPDIYLPPEDEVESLSAGEN 363
Query: 415 LEDVHLESEE 444
D++L SE+
Sbjct: 364 SPDINLPSEK 373
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 RSSGGGTTDVNIEYSADLSAL-SRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQL 321
++ G T V D +A+ + LE+K+ +DD+E + E + + +A+ S + +
Sbjct: 246 KAESSGPTPVASPVGKDCNAVVAELEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDV 305
Query: 322 SERLEEAE 345
++++E E
Sbjct: 306 KKKIDENE 313
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 190 ADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFE 369
+D +++LED+I +++ DLES R E E + + V +L+ LE A+ +
Sbjct: 262 SDNEMVAKLEDEIVVLKRDLESAR----GFEAEVKEKEMIVEKLNVDLEAAKMAESNAHS 317
Query: 370 INRKRDTELLKLRKLLEDVH 429
++ + ++ +L + LE+ +
Sbjct: 318 LSNEWQSKAKELEEQLEEAN 337
>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
like protein A, Arabidopsis thaliana, gb:Q07970
Length = 790
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 235 IQDDLESERELRQRIEREKADLSVQVIQL---SERLEEAEGGAE-SQFEINRKRDTELLK 402
+Q DLE RE R E+EK+ + + L S+ L++ + SQ E +++D+ L++
Sbjct: 236 LQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLME 295
Query: 403 LRKLLEDV 426
+ L ++
Sbjct: 296 VNNLQSEL 303
>At3g61710.2 68416.m06916 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 386
Score = 28.7 bits (61), Expect = 5.4
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = +1
Query: 106 NMSAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDKI-RLIQD---DLESERELRQ 273
N S T R+ T +E L + L DK+ + ++D D+E+ Q
Sbjct: 143 NTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVEDVTRDVEAYEACVQ 202
Query: 274 RIEREKADLSVQVIQLSE--RLEEAEGGAESQFEINRKRDTELLKLRKLLE 420
R+E E D+ + L E ++EE E + E K++ E+ K LE
Sbjct: 203 RLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQLKELE 253
>At3g61710.1 68416.m06915 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 517
Score = 28.7 bits (61), Expect = 5.4
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = +1
Query: 106 NMSAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDKI-RLIQD---DLESERELRQ 273
N S T R+ T +E L + L DK+ + ++D D+E+ Q
Sbjct: 143 NTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVEDVTRDVEAYEACVQ 202
Query: 274 RIEREKADLSVQVIQLSE--RLEEAEGGAESQFEINRKRDTELLKLRKLLE 420
R+E E D+ + L E ++EE E + E K++ E+ K LE
Sbjct: 203 RLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQLKELE 253
>At3g58270.1 68416.m06496 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 343
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 226 IRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKL 405
+ + D+L RE + + +D + ++L + +GG E+ D +L++
Sbjct: 77 VNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELKIVVDVSVLEV 136
Query: 406 RKLLEDVHLESEET 447
L DV +ESEET
Sbjct: 137 IGKL-DVPVESEET 149
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 220 DKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELL 399
D ++++++E E + IE + ++ +V ++ E EE E ++ E +KR ELL
Sbjct: 28 DPEEILEEEVEYEEVEEEEIEEIEEEIEEEV-EVEEE-EEEEDAVATEEEEEKKRHVELL 85
Query: 400 KLRKLLEDVHL 432
L +V+L
Sbjct: 86 ALPPHGSEVYL 96
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +1
Query: 181 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAES 360
E + + S LSR +K+ +LE E+E+ QR E + S E E E
Sbjct: 603 EMNKNTSILSRELEKVNTHASNLEDEKEVLQRSLGEAKNAS------KEAKENVEDAHIL 656
Query: 361 QFEINRKRDTELLKLRKLLEDV 426
+ ++R+ K++KL ED+
Sbjct: 657 VMSLGKEREVLEKKVKKLEEDL 678
>At1g08780.1 68414.m00977 prefoldin, putative similar to
Swiss-Prot:Q9NQP4 prefoldin subunit 4 (Protein C-1)
[Homo sapiens]
Length = 129
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 148 SSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIE 282
S G +V E +++ SRL +++ + DD++S +E + +E
Sbjct: 6 SKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLE 50
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 28.7 bits (61), Expect = 5.4
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Frame = +1
Query: 109 MSAMAKTSKYTYRSSGGGTTDVNIEYSAD--LSALSRLEDKIRLIQDDLE---SERELRQ 273
+ AMA ++ +R T V ++ +S +L++ + L Q ++RELR+
Sbjct: 825 LRAMAARKQFRFRKQTKAATIVQAQWRCHRAISYYKKLKNGVVLSQTRWRGRLAKRELRK 884
Query: 274 --RIEREKADLSVQVIQLSERLEEAEGGAE----SQFEINRKRDTELLKLRKLLEDVHLE 435
RE L L +++EE + S+ ++ + E+LKL+ E++ +
Sbjct: 885 LKMAARETGALKEAKDMLEKKVEELTYRVQLEKRSRGDLEEAKTQEILKLKSSFEEMRKK 944
Query: 436 SEETAXLL 459
+ET LL
Sbjct: 945 VDETNALL 952
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 181 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAES 360
++ D+ +L+R ++ + +E E +I+RE+AD + + LE
Sbjct: 607 QHKNDVESLNR--EREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKRE 664
Query: 361 QFEINRKRDTE-LLKLRKLLEDVHLES 438
+ E N RD E + K LE+ ++S
Sbjct: 665 ELE-NSSRDREKAFEQEKKLEEERIQS 690
>At4g33620.1 68417.m04775 Ulp1 protease family protein low
similarity to SP|Q9BQF6 SUMO-1-specific protease 2 (EC
3.4.22.-) (Sentrin-specific protease SENP7) {Homo
sapiens}; contains Pfam profile PF02902: Ulp1 protease
family, C-terminal catalytic domain
Length = 783
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 181 EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEE-AEGGAE 357
++S ++ + L+ + + I D +E E I DL + L++ E+ E
Sbjct: 245 KWSKEVETIRSLDSRYKNIWFDTITESE---EIAFSGHDLGTSLTNLADSFEDLVYPQGE 301
Query: 358 SQFEINRKRDTELLKLRKLLEDVHLE 435
+ RK+D ELLK R+ + D ++
Sbjct: 302 PDAVVVRKQDIELLKPRRFINDTIID 327
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 ADLSAL-SRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQF 366
A+L A +L+++ RLI+ +R ++ E EK L ++IQ E+ E E+
Sbjct: 240 AELEAKREKLDERARLIE-----QRAIKNEEEMEKTRLEREMIQ-KAMCEQNEANEEA-M 292
Query: 367 EINRKRDTELLKLRKLLEDVHLESEETAXL 456
++ K E KL K + ++ + ET L
Sbjct: 293 KLAEKHQKEKEKLHKRIMEMEAKLNETQEL 322
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +1
Query: 130 SKYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLES----ERELRQRIEREKAD 297
S T +S+G G D + ++++S+ + K +D ES E + R+ +EK +
Sbjct: 402 SSVTGKSTGSG--DGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEE 459
Query: 298 LSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEET 447
S Q + + E E S E N ++TE ++ LE+ + +ET
Sbjct: 460 SSSQEETMDKETEAKEKVESSSQEKNEDKETEKIE-SSFLEETKEKEDET 508
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 205 LSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKR 384
+ LE + ++ +LES R +E E A + V QL + E + +R
Sbjct: 747 IKELEATVATLELELESVRARIIDLETEIASKTTVVEQLEAQNREMVARISELEKTMEER 806
Query: 385 DTELLKLRKLLEDVHLESEETAXLL 459
TEL L + LED +S + L
Sbjct: 807 GTELSALTQKLEDNDKQSSSSIETL 831
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 235 IQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRK 381
I++DL+ EL +E EKA Q+ + + EEA + E +K
Sbjct: 92 IKEDLKKANELIASLENEKAKALDQLKEARKEAEEASEKLDEALEAQKK 140
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 202 ALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRK 381
A + ED+ R ++LE + + + + + DL +QV+ L LEEA + + E+N +
Sbjct: 106 ATAAAEDEKRKRMEELEEKLVVNESLIK---DLQLQVLNLKTELEEAR-NSNVELELNNR 161
Query: 382 R 384
+
Sbjct: 162 K 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,084,805
Number of Sequences: 28952
Number of extensions: 174018
Number of successful extensions: 766
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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