Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J19
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0536 + 23730396-23731736 33 0.22
01_01_0070 - 542603-542686,542803-543441 32 0.50
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.66
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 31 1.2
11_06_0610 - 25449085-25453284 30 2.0
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 30 2.7
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 30 2.7
04_03_0904 + 20717005-20718087 24 3.3
06_03_0905 + 25843547-25844314 29 3.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.5
12_02_1174 - 26696869-26698191 29 4.7
12_02_0299 - 17051570-17052474,17053542-17053755 29 4.7
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 29 6.2
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.2
02_01_0016 + 110796-110979,111252-111768,111847-112213 28 8.2
>02_04_0536 + 23730396-23731736
Length = 446
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +2
Query: 638 CALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXXPP 817
CALL P P P +P L+ P H P P+P G +A A P
Sbjct: 92 CALLPPPP-GFPPLPVPGLADEPVYAAPARHLPPPPGFPPLPVPGLADEPVYAAPARRLP 150
Query: 818 XPTPXPPPP 844
P PP P
Sbjct: 151 PPPGFPPLP 159
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +2
Query: 626 QAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVA 805
Q+P+ A P P +P P +P+ P P + P V P A V
Sbjct: 27 QSPAAAPAQPTPTPVPTAPAKSPPAPATP-APTATPTPPVAPAKAPPVAPAV----APVT 81
Query: 806 XXPPXPTPXPPPP 844
PP P PPPP
Sbjct: 82 PPPPTPKKAPPPP 94
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/80 (31%), Positives = 32/80 (40%)
Frame = +2
Query: 605 IPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXX 784
+P P S ++L D +LP P SPS + P + P +P P P
Sbjct: 499 LPPTTPPPCGSLSILSTDENQLP--PEVQHESPSDRKLP---SPSPTAAAPPPPPPPPPP 553
Query: 785 QXWAXVAXXPPXPTPXPPPP 844
A PP P P PPPP
Sbjct: 554 PSGNKPAFSPPPPPPPPPPP 573
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 536 PPERASQKSTLKSXVXKPDRTIKIPGRFPLQAPSCA 643
P ER + ++ ++S D IK+P R+PLQ PS A
Sbjct: 431 PSERPTMRAVVESLASVQD--IKVPCRYPLQEPSAA 464
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +2
Query: 632 PSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHT---LHPX*VSPVPXVGPFXXQXWAXV 802
P+ +L P P + P P +S P P L P V P P
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVK 1214
Query: 803 AXXPPXPTPXPPPP 844
+ PP P PPPP
Sbjct: 1215 SPPPPAPVILPPPP 1228
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +2
Query: 632 PSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXX 811
P+ +L P P + P P +S P + P P P A +
Sbjct: 1219 PAPVILPPPPVKSPPPPAPVISPPPPEKSP-------------PPAAPVILSPPAVKSLP 1265
Query: 812 PPXPTPXPPPP 844
PP P PPPP
Sbjct: 1266 PPAPVSLPPPP 1276
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +2
Query: 653 PDPCRLPGIPCXXLSSPSXKX--GPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXXPPXPT 826
P+ P +P S P+ K P +L P V P+P P + PP P
Sbjct: 1100 PEESSPPSVP-KASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPV 1158
Query: 827 PXPPPP 844
PPPP
Sbjct: 1159 ILPPPP 1164
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 721 LPPYPXPLXGISXXXCRSXPXPXLGXCCXXPPPSNPXPXP 840
L P+P P C CC PPP P P P
Sbjct: 95 LVPFPVPYPAPPPPSCCPPSTQQCYHCCPEPPPPPPKPKP 134
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/83 (31%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Frame = +2
Query: 605 IPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGP--- 775
IPG P P L P P +PG+ C SP P T P P P
Sbjct: 253 IPG-LPAGFPFL-LRPPPPLPVPGVICRPPPSPPYFAPPPRATPTVSLAGPPPGFNPKRG 310
Query: 776 FXXQXWAXVAXXPPXPTPXPPPP 844
+ A PTP PPPP
Sbjct: 311 LIGRGEAITLPESERPTPPPPPP 333
>04_03_0904 + 20717005-20718087
Length = 360
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 755 PVPXVGPFXXQXWAXVAXXPPXPTPXPP 838
P P P+ Q + P PTP PP
Sbjct: 308 PTPTPTPYKPQPKPTPSPYTPKPTPTPP 335
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 812 PPXPTPXPPPP 844
PP TP PPPP
Sbjct: 349 PPSYTPGPPPP 359
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.5 bits (63), Expect = 3.5
Identities = 29/111 (26%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Frame = +2
Query: 536 PPERASQKSTLKSXVXKPDRTIKIPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKX 715
P R + T S V +P + P P + P P P P +++P
Sbjct: 59 PTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPP---VTTPPVVV 115
Query: 716 GPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXX--------PPXPTPXPPPP 844
GP + P +P VGP V PP TP PPPP
Sbjct: 116 GPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPVTYPTPPTTTPCPPPP 166
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +2
Query: 617 FPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPX--VGPFXXQX 790
F + A P + + SSPS P P P+P P Q
Sbjct: 243 FSVAAAEAYARPPSTPAITAVSSVPRSSPSPAPAPAARPASPSPSLPLPPGRESPSRPQS 302
Query: 791 WAXVAXXPPXPTPXPPP 841
A A P P P PPP
Sbjct: 303 IAAAAVASPAPPPPPPP 319
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +2
Query: 605 IPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPX-VGPFX 781
+P R P P A++ P P P P + P L P P P + P
Sbjct: 228 VPPRTPGDTP--AVVEPKPQPPPPPPRAPVKMP--------RVLEPKPSPPPPSPLPPPP 277
Query: 782 XQXWAXVAXXPPXPTPXPPPP 844
W+ A PP PT PPP
Sbjct: 278 EDYWSPTAVTPPEPTKPKPPP 298
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/79 (27%), Positives = 26/79 (32%)
Frame = +2
Query: 608 PGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQ 787
P FP P P P +P S PS P P +P + F
Sbjct: 257 PPAFPFPLPPWPWAPPPAFPFPHLP-PIFSPPSPPPPP--PPAFPFPFPQLPPLPHFPPL 313
Query: 788 XWAXVAXXPPXPTPXPPPP 844
+ PP P P PPPP
Sbjct: 314 PSFYPSPPPPPPPPPPPPP 332
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +2
Query: 677 IPCXXLSSPSXKXGPFLHTLHPX*V---SPVPXVGPFXXQXWAXVAXXPPXPTPXPPPP 844
IP S+PS K P T P V P P Q A PP P PPPP
Sbjct: 41 IPVVLPSAPSSKPPPPTQTAPPVPVVISEPPPPQPQPEPQPAAPSQPPPPQEQPSPPPP 99
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +2
Query: 620 PLQAPS--CALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXW 793
PL +PS L P P P I +SSP+ P L P + P+ P
Sbjct: 155 PLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPP-LWRRRPRRLPPIWRPTP----PS 209
Query: 794 AXVAXXPPXPTPXPPPP 844
V PP P P PP P
Sbjct: 210 LPVDTMPPPPPPPPPQP 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,943,053
Number of Sequences: 37544
Number of extensions: 475420
Number of successful extensions: 3563
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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