BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_J19 (849 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 33 0.18 At4g27850.1 68417.m03999 proline-rich family protein contains pr... 32 0.42 At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 31 0.73 At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.7 At1g02405.1 68414.m00187 proline-rich family protein contains pr... 30 2.2 At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.0 At1g68170.1 68414.m07787 nodulin MtN21 family protein similar to... 29 3.9 At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 3.9 At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.2 At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.2 At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 5.2 At3g55480.2 68416.m06162 adaptin family protein similar to AP-3 ... 29 5.2 At3g55480.1 68416.m06161 adaptin family protein similar to AP-3 ... 29 5.2 At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 6.8 At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 6.8 At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 6.8 At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 6.8 At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 9.0 At5g20380.1 68418.m02424 transporter-related low similarity to v... 28 9.0 >At3g19430.1 68416.m02464 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 Length = 559 Score = 33.5 bits (73), Expect = 0.18 Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Frame = +2 Query: 620 PLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAX 799 P PS P P P + SP+ P T P SP P V P Sbjct: 102 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPS 161 Query: 800 V-AXXPPXPT---PXPPPP 844 V + PP PT P PPPP Sbjct: 162 VPSPTPPVPTDPMPSPPPP 180 Score = 31.1 bits (67), Expect = 0.97 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Frame = +2 Query: 629 APSCALLXPDPCRLPGIPCXX--LSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXV 802 +P+ + P P P +P +S P P + + P P P P V Sbjct: 92 SPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPV 151 Query: 803 AXXPPXPTPXPPPP 844 + PP PTP P P Sbjct: 152 SPPPPTPTPSVPSP 165 Score = 30.7 bits (66), Expect = 1.3 Identities = 22/75 (29%), Positives = 25/75 (33%) Frame = +2 Query: 620 PLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAX 799 P PS P P P + SP+ P T P SP P V P Sbjct: 84 PPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPS 143 Query: 800 VAXXPPXPTPXPPPP 844 V P +P PP P Sbjct: 144 VPSPTPPVSPPPPTP 158 Score = 30.3 bits (65), Expect = 1.7 Identities = 21/78 (26%), Positives = 27/78 (34%) Frame = +2 Query: 611 GRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQX 790 G + AP + P P P +S P P + + P P P P Sbjct: 70 GGYTPPAPVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSP 129 Query: 791 WAXVAXXPPXPTPXPPPP 844 V+ PP PTP P P Sbjct: 130 TPPVSPPPPTPTPSVPSP 147 Score = 29.5 bits (63), Expect = 3.0 Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Frame = +2 Query: 620 PLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXV--GPFXXQXW 793 P PS P P P + SP+ P T P SP P V P Sbjct: 120 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPP- 178 Query: 794 AXVAXXPPXPTPXPPPP 844 V+ PP PTP P P Sbjct: 179 PPVSPPPPTPTPSVPSP 195 Score = 29.1 bits (62), Expect = 3.9 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Frame = +2 Query: 587 PDRTIKIPGRFPLQAPSCALLXPD-PCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVP 763 P T +P P +P P P P +P + SP P T P SP P Sbjct: 138 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSP-P 196 Query: 764 XVGPFXXQXWAXVAXXPPXPTPXPPPP 844 V P PP TP PP P Sbjct: 197 DVTPTPP---TPSVPSPPDVTPTPPTP 220 >At4g27850.1 68417.m03999 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 577 Score = 32.3 bits (70), Expect = 0.42 Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Frame = +2 Query: 608 PGRFPLQAPSCALLXP---DPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPF 778 P P P L P P LPG P SPS GP P SP+P GP Sbjct: 178 PSPSPTPGPDSPLPSPGPDSPLPLPGPP----PSPSPTPGPDSPLPSPGPDSPLPLPGP- 232 Query: 779 XXQXWAXVAXXPPXPTPXPPP 841 P P+P PPP Sbjct: 233 PPSSSPTPGPDSPLPSPGPPP 253 Score = 29.5 bits (63), Expect = 3.0 Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Frame = +2 Query: 587 PDRTIKIPGRFPLQAPSCALLXPD-PCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVP 763 PD + +PG P +P+ PD P PG P SPS GP P SP+P Sbjct: 223 PDSPLPLPGPPPSSSPTPG---PDSPLPSPGPP----PSPSPTPGPDSPLPSPGPDSPLP 275 Query: 764 XVGPFXXQXWAXVAXXPPXPTPXP 835 GP PP P+P P Sbjct: 276 SPGP-----------DPPLPSPGP 288 >At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 428 Score = 31.5 bits (68), Expect = 0.73 Identities = 26/86 (30%), Positives = 31/86 (36%) Frame = +2 Query: 587 PDRTIKIPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPX 766 P T+K P ++ P + P P P P P P T+ P P P Sbjct: 99 PPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTP-----PPPTPYTPPPPTVKPP---PPPV 150 Query: 767 VGPFXXQXWAXVAXXPPXPTPXPPPP 844 V P PP PTP PPPP Sbjct: 151 VTPPPPTPTPEAPCPPPPPTPYPPPP 176 Score = 29.9 bits (64), Expect = 2.2 Identities = 29/107 (27%), Positives = 38/107 (35%) Frame = +2 Query: 524 HRLXPPERASQKSTLKSXVXKPDRTIKIPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSP 703 H + PP+ + K V P T K P ++ P + P P P P P Sbjct: 37 HPVKPPKHPA-KPPKPPTVKPPTHTPKPP---TVKPPPPYIPCPPPPYTPKPPTVKPPPP 92 Query: 704 SXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXXPPXPTPXPPPP 844 P++ P V P P P+ PP PTP PPP Sbjct: 93 -----PYVKPPPPPTVKPPPP--PYVKPPPPPTVKPPPPPTPYTPPP 132 >At4g13340.1 68417.m02084 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 760 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/42 (35%), Positives = 16/42 (38%) Frame = +1 Query: 724 PPYPXPLXGISXXXCRSXPXPXLGXCCXXPPPSNPXPXPPXY 849 PP P P + P P PPPS P P PP Y Sbjct: 454 PPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVY 495 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/42 (33%), Positives = 15/42 (35%) Frame = +1 Query: 724 PPYPXPLXGISXXXCRSXPXPXLGXCCXXPPPSNPXPXPPXY 849 PP P P + P P PPP P P PP Y Sbjct: 439 PPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVY 480 >At1g02405.1 68414.m00187 proline-rich family protein contains proline-rich region, INTERPRO:IPR000694 Length = 134 Score = 29.9 bits (64), Expect = 2.2 Identities = 15/42 (35%), Positives = 15/42 (35%) Frame = +1 Query: 724 PPYPXPLXGISXXXCRSXPXPXLGXCCXXPPPSNPXPXPPXY 849 PP P P S P P C P P P P PP Y Sbjct: 52 PPSPPPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPPNY 93 >At4g33970.1 68417.m04820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 699 Score = 29.5 bits (63), Expect = 3.0 Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Frame = +2 Query: 578 VXKPDRTIKIPGRFPLQAPSCALLXPDPCRLPGI--PCXXLSSPSXKXGPF----LHTLH 739 V KP P + P P+ + P P + P L++P K P + Sbjct: 436 VHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQ 495 Query: 740 PX*VSPVPXVGPFXXQXWAXVAXXPPXPTPXPPPP 844 P SP P P+ PP P PPPP Sbjct: 496 PPKESPQPD-DPYDQSPVTKRRSPPPAPVNSPPPP 529 Score = 27.9 bits (59), Expect = 9.0 Identities = 19/64 (29%), Positives = 22/64 (34%) Frame = +2 Query: 653 PDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVAXXPPXPTPX 832 P P P P P P +H+ P SP P P + PP P Sbjct: 562 PPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPA-PVHSPPPPVHSPPPPPPVYS 620 Query: 833 PPPP 844 PPPP Sbjct: 621 PPPP 624 >At1g68170.1 68414.m07787 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] Length = 356 Score = 29.1 bits (62), Expect = 3.9 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -3 Query: 520 KRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAA 383 +R++R FT +LLA S +L VIP IL IT L S AA Sbjct: 54 QRKKRPEFTCRLMLLALLSGLLGVVIPSILTITGLALTSATFTSAA 99 >At1g49490.1 68414.m05547 leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 847 Score = 29.1 bits (62), Expect = 3.9 Identities = 26/102 (25%), Positives = 32/102 (31%) Frame = +2 Query: 539 PERASQKSTLKSXVXKPDRTIKIPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXG 718 P+ S +K+ P ++ P Q P + P P P P P Sbjct: 508 PDDPYDASPVKNRRSPPPPKVEDTRVPPPQPPMPSPSPPSPIYSPPPPVHSPPPPVYSSP 567 Query: 719 PFLHTLHPX*VSPVPXVGPFXXQXWAXVAXXPPXPTPXPPPP 844 P H P P P P V PP P PPPP Sbjct: 568 PPPHVYSP----PPPVASPPPPSPPPPVHSPPPPPVFSPPPP 605 >At5g45050.2 68418.m05524 disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat Length = 1344 Score = 28.7 bits (61), Expect = 5.2 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +2 Query: 341 PLPRSLTRCARSFGCGERYQLTQRR 415 P PRS RCA S GC R Q+ + R Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193 >At5g45050.1 68418.m05523 disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat Length = 1372 Score = 28.7 bits (61), Expect = 5.2 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +2 Query: 341 PLPRSLTRCARSFGCGERYQLTQRR 415 P PRS RCA S GC R Q+ + R Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221 >At4g16140.1 68417.m02445 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 164 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +1 Query: 766 CRSXPXPXLGXCCXXPPPSNPXPXPP 843 C S P PPPSNP P PP Sbjct: 34 CTSCDNPCQPNPSPPPPPSNPSPPPP 59 >At3g55480.2 68416.m06162 adaptin family protein similar to AP-3 complex beta3A subunit, Homo sapiens, SP|O00203; contains Pfam profile: PF01602 Adaptin N terminal region Length = 987 Score = 28.7 bits (61), Expect = 5.2 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -3 Query: 487 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 389 GL L F S +LS IPL++ ITV +E++ L Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956 >At3g55480.1 68416.m06161 adaptin family protein similar to AP-3 complex beta3A subunit, Homo sapiens, SP|O00203; contains Pfam profile: PF01602 Adaptin N terminal region Length = 987 Score = 28.7 bits (61), Expect = 5.2 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -3 Query: 487 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 389 GL L F S +LS IPL++ ITV +E++ L Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956 >At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to hydroxyproline-rich glycoprotein DZ-HRGP from Volvox carteri f. nagariensis GP|6523547; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 375 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +1 Query: 778 PXPXLGXCCXXPPPSNPXPXPP 843 P P + C PPP P P PP Sbjct: 33 PPPCICICNPGPPPPQPDPQPP 54 >At3g20830.1 68416.m02634 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 408 Score = 28.3 bits (60), Expect = 6.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -2 Query: 332 PIRKPPLPARWPIH*CRKNLPHL 264 P PP P R P H CRKN P + Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406 >At1g26150.1 68414.m03192 protein kinase family protein similar to Pto kinase interactor 1 GI:3668069 from [Lycopersicon esculentum] Length = 760 Score = 28.3 bits (60), Expect = 6.8 Identities = 24/86 (27%), Positives = 29/86 (33%) Frame = +2 Query: 587 PDRTIKIPGRFPLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPX 766 P T P + P L P P P P L+ P P P P+P Sbjct: 50 PPETTNTPAQSS-PPPETPLSSPPP--EPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPT 106 Query: 767 VGPFXXQXWAXVAXXPPXPTPXPPPP 844 P V+ PP +P PPPP Sbjct: 107 EAPPPANP---VSSPPPESSPPPPPP 129 >At1g20130.1 68414.m02518 family II extracellular lipase, putative contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566) Length = 1006 Score = 28.3 bits (60), Expect = 6.8 Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 4/79 (5%) Frame = +2 Query: 620 PLQAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSP----VPXVGPFXXQ 787 P+ P+C P P P P +P P P +P VP GP Sbjct: 62 PVPPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKP 121 Query: 788 XWAXVAXXPPXPTPXPPPP 844 A P P P PP P Sbjct: 122 APAPTPAPSPKPAPSPPKP 140 >At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 205 Score = 27.9 bits (59), Expect = 9.0 Identities = 20/73 (27%), Positives = 24/73 (32%) Frame = +2 Query: 626 QAPSCALLXPDPCRLPGIPCXXLSSPSXKXGPFLHTLHPX*VSPVPXVGPFXXQXWAXVA 805 Q P + + P P + P S P P H SP P P + Sbjct: 17 QHPLPSPVPPPPSHISPPP-PPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPH 75 Query: 806 XXPPXPTPXPPPP 844 PP P PPPP Sbjct: 76 QPPPPPHVLPPPP 88 >At5g20380.1 68418.m02424 transporter-related low similarity to vesicular glutamate transporter 3 [Rattus norvegicus] GI:21685382 Length = 517 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = -3 Query: 505 GLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAER 374 G +T L + S LS + W+++LPPL+ ++ + A + Sbjct: 332 GHYTCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQ 375 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,327,711 Number of Sequences: 28952 Number of extensions: 323289 Number of successful extensions: 1909 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 955 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1505 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1970388800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -