Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J16
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   175   2e-45
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.9  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  175 bits (425), Expect = 2e-45
 Identities = 83/137 (60%), Positives = 94/137 (68%)
 Frame = +2

Query: 101 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 280
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK    
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 281 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 460
                              TYGKPKSHGVNQLKP R LQS+AEE            +SYW
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120

Query: 461 VAQDSSYKYFEVILVDP 511
           VAQD+++KYFEVI+VDP
Sbjct: 121 VAQDAAHKYFEVIMVDP 137



 Score = 83.0 bits (196), Expect = 1e-17
 Identities = 37/50 (74%), Positives = 41/50 (82%)
 Frame = +3

Query: 522 IRRDPXINWIVNAVHKHXEMRGLTSAGXSSRGLGKGHXYSQTKGXSRRGS 671
           IRRDP +NWI NAVHKH E+RGLTSAG SSRGLGK + YSQT G SRR +
Sbjct: 142 IRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAA 191


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 50   LLRFTVGHARRLPQAAKMGAYRYI 121
            LLR  +    RLPQ A    Y YI
Sbjct: 1942 LLRHLIRFVPRLPQQAAFALYNYI 1965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,407
Number of Sequences: 2352
Number of extensions: 16288
Number of successful extensions: 40
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)