Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J15
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.7  
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396...    29   6.5  
01_06_0203 - 27487469-27489787                                         28   8.5  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 261  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 359
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>03_01_0527 +
           3960982-3961290,3961371-3961464,3961898-3962084,
           3962194-3962449,3962561-3962773,3962856-3962942,
           3963089-3963223,3963296-3963409,3963507-3963754,
           3963824-3963904,3963979-3964210,3964340-3964438,
           3964513-3964701,3964928-3965023
          Length = 779

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 742 KPIXSSLVGVSQGNGNRWAYXXNWXVXWXNSGNYNIXSRQGNHP 611
           K I +S++ V  GN N   +  +    W ++ NY    R+GNHP
Sbjct: 478 KEIWNSMMLVHWGNTNT-KHKNSTTAYWADNWNYIPIDRRGNHP 520


>01_06_0203 - 27487469-27489787
          Length = 772

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 740 LTXPDXCWPKCLLFXNFPSPLYP 808
           LT    C+PK LLF  + SP +P
Sbjct: 371 LTGTGVCYPKGLLFNGYKSPAFP 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,222,876
Number of Sequences: 37544
Number of extensions: 337369
Number of successful extensions: 666
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)