Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J10
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.77 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    24   1.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.5  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 49  LLCVAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGSDGATRRSRLL 192
           +LC  +RF     + S  Y++ A  +  +  I       G+ +R+R+L
Sbjct: 117 VLCKIIRFLQAVVTYSSTYVLVALSIDRYDAITHPMNFSGSWKRARVL 164


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
 Frame = +2

Query: 170 RRDAPDFFKDIEH-----HTKEFHKT--LEQQFNSLTKS 265
           RR AP  F+DI+H     + +E  +T  L + F SL KS
Sbjct: 84  RRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFASLRKS 122


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 273 ASFDLVSELNCCSKVLWNSLV 211
           A  D  SE++C S+ +W+ L+
Sbjct: 102 ALLDTGSEVSCISEEVWSKLI 122


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 437  GAPRPCARCSASTVPKPPWPCRSRLRALPG 348
            G P+P + CS +     P  C   L  L G
Sbjct: 1271 GGPQPYSACSENAFAAYPGDCTRYLHCLWG 1300


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 78  RCEPDCNTEEC 46
           RC+ +CNT  C
Sbjct: 501 RCDEECNTYAC 511



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 75  CEPDCNTEECV 43
           C  DCN  EC+
Sbjct: 543 CNEDCNNPECL 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,405
Number of Sequences: 336
Number of extensions: 2226
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)