Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J10
(867 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34) 32 0.53
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 30 2.1
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 29 3.7
SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79) 29 4.9
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 4.9
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 28 8.6
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 IEHHTKEFHKTLEQQFNSLTKSKDA-QDFSKAWKDGSESVLQQLNAFAKSLQGALGDANG 376
I HH + + +E+ N T ++ QDF ++ + S + N ++ +LGD
Sbjct: 248 IGHHIGDRGRVVERSLNRRTNEEERKQDFINMDENDAPSFDNEWNHRTRTAMHSLGDVRK 307
Query: 377 KAKEALEQSRQNIER 421
+ ALE+ R+ +R
Sbjct: 308 DTRRALEEPRKRHDR 322
>SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34)
Length = 337
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +2
Query: 194 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAW---------KDGSESVLQQLNAFAKS 346
KD +++ + ++ + + + KDA ++ W +D SES ++N F
Sbjct: 141 KDKTREAEKYQRQIKDNESEIQRLKDAIEYRDNWLAERGLNLYEDNSESNKDEINVFESL 200
Query: 347 LQGALGDANGKAKEALEQSR 406
+G+ D +G K + +SR
Sbjct: 201 REGSTIDESGSEKSSFSESR 220
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 194 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 331
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK 442
+G+E+ + QL +SLQ L DA +++ L++S +E ++ K
Sbjct: 420 EGTETAIHQLKKENESLQTRLSDAQALSQKQLKESSSRLEEMHQQHNK 467
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 176 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQG 355
D DFFK++ TKEF + ++ ++ K A + S +KD E++ Q A K+++G
Sbjct: 1012 DITDFFKELGPATKEFAEESVKKVCAVYKF--ALNSSSDFKDFGENMESQSIAIMKTVKG 1069
Query: 356 ALGDA 370
+ +A
Sbjct: 1070 DVQNA 1074
>SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/104 (18%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +2
Query: 149 WPKVAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFS---KAWKDGSESVL 319
+PK+ + + ++ I + ++ N TK +D+ + W+ + +L
Sbjct: 139 YPKITIKEGEFETYWMRISNVLISLGGNKDEIDNLKTKRPATRDYVGVLQQWRASDDEIL 198
Query: 320 QQLNAFAKSLQGALGDAN---GKAKEALEQSRQNIERTAEELRK 442
Q+L+ K ++ + +A +AK++L++++Q+ E + + R+
Sbjct: 199 QELHKQRKEMKQSFEEAKQSFEEAKQSLKEAKQSFEGSETKRRR 242
>SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79)
Length = 1091
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +2
Query: 149 WPKVAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 328
W + ++ RR P K + E KTLE++ L + + S S
Sbjct: 731 WSRSSLERRKQP---KPLIRDQLEPIKTLEERTMDLENEERVNGLPRVVSAPSTSSDLNS 787
Query: 329 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 433
N KSL+ +L + + L+ IER EE
Sbjct: 788 NQRVKSLENSLDFLQAQHSQVLDNLHDEIERLKEE 822
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 431 PRPCARCSASTVPKPPWPCRSRLRALPGD 345
P+ RC +S PW C S + AL GD
Sbjct: 821 PKRIPRCESSETRHWPWSCASGIAALVGD 849
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 428 RPCARCSASTVPKPPWPCRSRLRALPGD 345
+ C C P PP PC+ R+ LP D
Sbjct: 121 KSCFSCRRRQQPPPPPPCQQRMADLPVD 148
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 243 CCSKVLWNSLVWCSMSLKKSGASRRTIATLGQSDAG 136
CC VW + + + G +RR I T GQ G
Sbjct: 2 CCDSRKGTGTVWLVLDVLRDGTNRRRICTEGQRYTG 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,552
Number of Sequences: 59808
Number of extensions: 303371
Number of successful extensions: 1058
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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