Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J10
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   5.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.1  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 25  REFLRFDTLLCVAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGSDGATRRSRLLQGHR 204
           ++F+  + +   AVR  S   SV   Y++   +  L  C++ A  S     RS+  +  R
Sbjct: 36  KKFVIRNIVEAAAVRDISDA-SVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIR 94

Query: 205 TPHQ 216
           TP Q
Sbjct: 95  TPPQ 98


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 424 RALDVLPRLFQSLLGLAV-RVSERSLETLGEGVELL 320
           RALD+ P+   +L+GLA+ +++    E+   GV++L
Sbjct: 222 RALDLEPQCVGALVGLAILKLNLHEPESNRMGVQML 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,493
Number of Sequences: 2352
Number of extensions: 9550
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)