Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J10
         (867 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011621-1|AAH11621.1|  728|Homo sapiens hook homolog 1 (Drosoph...    31   5.4  
AL035416-6|CAI22779.1|  728|Homo sapiens hook homolog 1 (Drosoph...    31   5.4  
AF044923-1|AAC09298.1|  728|Homo sapiens hook1 protein protein.        31   5.4  
AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76 ...    30   9.5  

>BC011621-1|AAH11621.1|  728|Homo sapiens hook homolog 1
           (Drosophila) protein.
          Length = 728

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +2

Query: 215 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ----GALGDANGKA 382
           +E  + LEQ+   + + +  Q  SK   +    + QQ+    KSLQ     + G+++ K 
Sbjct: 490 EELQEQLEQKHRKMNELETEQRLSK---ERIRELQQQIEDLQKSLQEQGSKSEGESSSKL 546

Query: 383 KEALEQSRQNIERTAEELRK 442
           K+ LE   + +    EEL+K
Sbjct: 547 KQKLEAHMEKLTEVHEELQK 566


>AL035416-6|CAI22779.1|  728|Homo sapiens hook homolog 1
           (Drosophila) protein.
          Length = 728

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +2

Query: 215 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ----GALGDANGKA 382
           +E  + LEQ+   + + +  Q  SK   +    + QQ+    KSLQ     + G+++ K 
Sbjct: 490 EELQEQLEQKHRKMNELETEQRLSK---ERIRELQQQIEDLQKSLQEQGSKSEGESSSKL 546

Query: 383 KEALEQSRQNIERTAEELRK 442
           K+ LE   + +    EEL+K
Sbjct: 547 KQKLEAHMEKLTEVHEELQK 566


>AF044923-1|AAC09298.1|  728|Homo sapiens hook1 protein protein.
          Length = 728

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +2

Query: 215 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ----GALGDANGKA 382
           +E  + LEQ+   + + +  Q  SK   +    + QQ+    KSLQ     + G+++ K 
Sbjct: 490 EELQEQLEQKHRKMNELETEQRLSK---ERIRELQQQIEDLQKSLQEQGSKSEGESSSKL 546

Query: 383 KEALEQSRQNIERTAEELRK 442
           K+ LE   + +    EEL+K
Sbjct: 547 KQKLEAHMEKLTEVHEELQK 566


>AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76
           (expressed in testis) variant protein.
          Length = 222

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 434 APRPCARCSASTVPKPPWPCRSRLRALPGDSW 339
           +P P A  +  T   PPWPC S   A+P  SW
Sbjct: 162 SPTPAAPAARPTGRPPPWPCTS---AVPMASW 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,472,751
Number of Sequences: 237096
Number of extensions: 1472029
Number of successful extensions: 5056
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5056
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)