Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J10
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024502-4|AAB70374.1|  675|Caenorhabditis elegans Hypothetical ...    38   0.007
AC006834-9|AAL11490.1|  447|Caenorhabditis elegans Hypothetical ...    31   0.81 
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF036699-6|AAB88357.1|  170|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.5  
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    28   7.5  
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AF024502-4|AAB70374.1|  675|Caenorhabditis elegans Hypothetical
           protein M151.2 protein.
          Length = 675

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
 Frame = +2

Query: 155 KVAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNA 334
           K+A   R   D  K++E++ +     L++Q N   K+KD  +  K+ K  +    +   A
Sbjct: 99  KLAEQGRKKDDKLKELENNAEALKTQLQEQTNDAKKAKD--ELQKSLKSAAARATEATTA 156

Query: 335 FAKSLQGALGDANGK-------AKEALEQSRQNIERTAEELRK 442
            A+ LQ  L     +       AKEAL   +QN ER   EL+K
Sbjct: 157 VAE-LQAKLQTVEKEHKKEIEDAKEALAAEKQNSEREKMELKK 198


>AC006834-9|AAL11490.1|  447|Caenorhabditis elegans Hypothetical
           protein ZK973.11 protein.
          Length = 447

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 215 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 322
           +EFHKT E+    L K  D  + F  AW DGS+   Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 176 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 277
           D  +F KDI+   K+ HKTLE   + + K +D Q
Sbjct: 594 DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627


>AF036699-6|AAB88357.1|  170|Caenorhabditis elegans Hypothetical
           protein F58F6.3 protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 449 GGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 339
           GG  GA    A C A++ P PP+   S  RA+P   W
Sbjct: 96  GGEGGAKNNRAVCLAASRPPPPYLIYSGRRAMPSAEW 132


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 449 GGPCGAPRPCARCSASTVPKPP 384
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
           protein R05D3.1 protein.
          Length = 1053

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +2

Query: 176 DAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 313
           +A ++F D++HHT  F    T +     +   +D  D  K W   SE+
Sbjct: 525 EAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572


>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
           protein H20J04.2 protein.
          Length = 1427

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 218 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALE 397
           +F   LEQ+ N L + K  Q   KAW  G E    + NA    L+ A   A+G A +  E
Sbjct: 680 KFRGHLEQRQNELVELKREQKKLKAWDVGQEG---EANAARLLLELAPAGASG-APDVKE 735

Query: 398 QSRQNIER 421
           Q    + R
Sbjct: 736 QKEPPVVR 743


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,487,173
Number of Sequences: 27780
Number of extensions: 220058
Number of successful extensions: 890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)