Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J09
(1019 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 4e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.007
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.021
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.021
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.028
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.11
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.11
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.26
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 30 0.46
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.60
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.80
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.4
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 28 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 7.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 9.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 9.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PP P PP PS PP P P PPLPP A P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 34.3 bits (75), Expect = 0.028
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
Frame = +2
Query: 725 PPPPPPPXXXXX---PXP-----SXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPPPPP P P + PPPP AP PPL PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPP----PXXXAP-XXXPXRPPLPPPA 841
PPP PPP P PP P P +PPLPPP+
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
PPPPPP P PPP + PP PPPA
Sbjct: 361 PPPPPP--RSAPSTGRQPPP--LSSSRAVSNPPAPPPA 394
Score = 31.5 bits (68), Expect = 0.20
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 725 PPPPPPPXXXXXPX-PSXPP--PPXXXAPXXXPXRPPLPPPAXXXXP 856
PP PP P P PP P P P PPLPP A P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 30.3 bits (65), Expect = 0.46
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXP--PPPXXXAPXXXPXRPPLPP--PAXXXXPP 859
PP PP PS P P P P PPLP PA PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 717 SSXPPPPPPPXXXXXPXXXXXPPXXXXPPXXXXXAPP 827
SS PPPPPPP P PP + P
Sbjct: 334 SSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +3
Query: 720 SXPPPPPPPXXXXXPXXXXXPPXXXXPPXXXXXAP--PFLPPXXXXPP 857
S PP PP P PP P P P LPP PP
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPP--PPXXXAPXXXPXRPPLPPPA 841
PP PP P P+ P PP P P PP P PA
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPL---PPAAPAPPPAPAPA 483
Score = 27.9 bits (59), Expect = 2.4
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 11/56 (19%)
Frame = +2
Query: 725 PPPPPP---PXXXXXPXP-------SXPPPPXXXAPXXX-PXRPPLPPPAXXXXPP 859
PPPPPP P P P S PP P P P PPL + PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +2
Query: 725 PPPPPPPXXXXXP--XPSXPP-PPXXXAPXXXPXRPPLPPPA 841
P PP P P P+ PP PP AP P P P A
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPPPP P P+ P P P PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 35.5 bits (78), Expect = 0.012
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
P PPP P P P PPPP P PP PPPA
Sbjct: 750 PVPPPAPIMGGPPPP--PPPPGVAGAGPPP--PPPPPPA 784
Score = 34.3 bits (75), Expect = 0.028
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLP 832
PPPPPPP P PPPP + P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 33.1 bits (72), Expect = 0.065
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 725 PPPPPP---PXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPPP P P P PP P P P PP P A PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAGAGPPP 777
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PPPPPP PPPP A R P P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 760 PXPXXXXPPXXXXPPPXXXPPPPSSPRXPXXPP 858
P P P PPP PP + P PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Frame = +1
Query: 760 PXPXXXXPPXXXXPPPXXXPPPP----SSPRXPXXPP 858
P P PP P PPPP + P P PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.3 bits (80), Expect = 0.007
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 855 GXXXXAGGGRGGRXGXXXGAXXXGG--GGXXGXGXXXXXGGGGGGG 724
G GG RGGR G G GG GG G G GG GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 35.1 bits (77), Expect = 0.016
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGGGXK 718
GG GG RGG G G GG G G GG GG K
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 33.5 bits (73), Expect = 0.049
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGG--GGR 717
GG G RG GG GG GG G G GG GG GGR
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR 57
Score = 33.1 bits (72), Expect = 0.065
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGGG 724
GG GG GGR G G GG G G GG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 32.7 bits (71), Expect = 0.085
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -1
Query: 857 GGXXGXRGEEGGG-GXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G RG GGG G GGG G G GG GG G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGGG 724
GG GG GGR G G GGG G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 31.9 bits (69), Expect = 0.15
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGG--GGR 717
GG G G GG G GG G G G GG GG GGR
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 857 GGXXGXRGE-EGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G RG GG G GG GG G GG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 30.3 bits (65), Expect = 0.46
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G RG GGG GG GG G GG GG G
Sbjct: 26 GGFGGGRGGARGGG--RGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 29.9 bits (64), Expect = 0.60
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGG 727
GG GG G R G GA GG G GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -1
Query: 845 GXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGG--GGR 717
G RG GG GG GG G G GGG GG GGR
Sbjct: 6 GSRGGRGGS---RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR 47
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G G G GG GG GG G G GG GG
Sbjct: 23 GGRGGFGG--GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.021
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
P PPPP P PS PP P P P PPLP + P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP--AGPPSAPP-PPLPASSAPSVP 1744
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 799 PPPXXXPPPPSSPRXPXXPP 858
PPP PPPPS+P P PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPP 1728
Score = 29.5 bits (63), Expect = 0.80
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 731 PPPPPXXXXXPXPSXP-PPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PP P P S P PPP + P PP+P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 29.5 bits (63), Expect = 0.80
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 781 PPXXXXPPPXXXPPPPSSPRXPXXPP 858
PP PPP PP P+ P PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPP 787
PPPP P P PS PPPP
Sbjct: 1715 PPPPSAPPMPAGP-PSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 720 SXPPPPPPPXXXXXPXXXXXPPXXXXPPXXXXXAPPFLP 836
S P PPPPP P PP PP PP LP
Sbjct: 1703 SAPTPPPPP--MSVPPPPSAPPMPAGPP---SAPPPPLP 1736
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAP 802
PPP PP P PP P AP
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = +2
Query: 731 PPPPPXXXXXPXPS--XPPPPXXXAPXXXPXRPPLPPPA 841
PP P P PPP P P PP P PA
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.021
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 9/53 (16%)
Frame = +2
Query: 725 PPPPPP-----PXXXXXPXPSXPPPPXXXAPXXXPXRPP----LPPPAXXXXP 856
P PP P P P PS PPP AP PP LPPPA P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPP-PXXXAPXXXPXRPPLPPPAXXXXP 856
P PPP P PS PP P P P P PP+ P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 31.1 bits (67), Expect = 0.26
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +2
Query: 725 PPPP---PPPXXXXXPXPSX-PPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PP P PP P PS PPP AP P P P A PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 30.7 bits (66), Expect = 0.34
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 767 PSXPPPPXXXA----PXXXPXRPPLPPPAXXXXPP 859
PS P PP + P P RP +PPP+ PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXP-SXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
P PP P P S PP P P PP P A PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
P PP P P+ P P +P P P PP PP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +2
Query: 725 PPPP---PPPXXXXXPXPSXPPPPXXXAPXXXPXRPP-LPPPAXXXXP 856
PP P PPP P S P P P P PP +PPP P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSL--PSAVPPMPPKVPPPPLSQAP 210
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
P PP P P S PP P P P PP PP
Sbjct: 128 PAPPTPQSELRPPTSAPP-----RPSIPPPSPASAPPIPSKAPP 166
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 767 PSXPPPPXXXAPXXXPXRPPL 829
P+ PPPP AP PPL
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPL 23
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPP 787
P PPPP P + P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.028
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPP 787
PPPPPPP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 34.3 bits (75), Expect = 0.028
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPP 787
PPPPPPP P PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.60
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 767 PSXPPPPXXXAPXXXPXRPPLPPP 838
P PPPP P +PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G G GG GGG GG G GGG GG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 31.1 bits (67), Expect = 0.26
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGG 727
GG GG GG G G GGG G GGG GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.34
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G G GGG GGG GG G G GG GG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGG----GPGGFGGGPGGHGGPG 272
Score = 30.3 bits (65), Expect = 0.46
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G GG G GG GG G GG GGG G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G G GG GG GG G G GGG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGGG 724
GG GGG GG G GG G G G GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 29.5 bits (63), Expect = 0.80
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
GG G GG G GG GG G G GGG GG G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF-GGGLGGFG 255
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
G G G GGG GG GG G GGG GG G
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGG 723
G RG GGG GGG G G G GG GG G
Sbjct: 177 GNLFHHRGHNGGGFGGFGGG----SGGPPPGPGGFGGFGGFGGEG 217
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGG 720
G G G GGG G GG G G GG GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGGGXK 718
GG GG RGG G G G G G G GG GG +
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Score = 30.7 bits (66), Expect = 0.34
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 858 GGXXXXAG-GGRGGRXGXXXGAXXXGGG---GXXGXGXXXXXGGGGGGGXK 718
G AG GGRGG G G+ GG G G G GGG GG +
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR 179
Score = 30.7 bits (66), Expect = 0.34
Identities = 20/47 (42%), Positives = 20/47 (42%)
Frame = -1
Query: 857 GGXXGXRGEEGGGGXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGGR 717
GG G RG G GG G G GG G G GGG GG R
Sbjct: 138 GGRGGFRG--GRGGSRGGFGGNSRGG---FGGGSRGGFGGGSRGGSR 179
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 857 GGXXGXRGEEGGG--GXXXGGGXXXXGGXXXXGXGXXXXXGGGGGGGGR 717
GG G RG GG G GG GG G G GG GR
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 858 GGXXXXAGGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGG 727
GG GG G R G + GGG G GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPS----XPPPPXXXAPXXXPXR--PPLPPPAXXXXP 856
PP PPP P PS PPP P P PP+P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 31.1 bits (67), Expect = 0.26
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
PP PPP P PS PP P PP+P P+
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPP---VPVPTAKAPPVPAPS 1243
Score = 30.7 bits (66), Expect = 0.34
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PP P P P PS PP P PP+P PA P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPP---VPAPSSGIPPVPKPAAGVPP 1190
Score = 30.3 bits (65), Expect = 0.46
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PP P P P P PP P PP+PPP+ P
Sbjct: 1179 PPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
PP P P P P+ PP + PP+P P+
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PP P P P PS PP P PP+P P+ P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPP---VPKPSVAVPPVPAPSGAPPVP 1124
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PP P P P P+ P P PP+PPP+ P
Sbjct: 1159 PPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PP P P P PS PP AP PP+P P+ P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPP-VPAP---SGAPPVPKPSVAAPP 1170
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PPP P P P+ P AP P P+P P+ P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIP---PVPKPSVAAPP 1103
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPP---LPP-PAXXXXPP 859
PP P P P PS PP P P PP PA PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXP 856
PP P P P P+ P P PP+P P+ P
Sbjct: 1140 PPVPKPSVAAPPVPA--PSGAPPVPKPSVAAPPVPAPSSGIPP 1180
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 30.3 bits (65), Expect = 0.46
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPP 835
PPPPPP S PP P + P PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.60
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 837 GGGRGGRXGXXXGAXXXGGGGXXGXGXXXXXGGGGGG 727
GG RGGR G G GG G G G GG G
Sbjct: 447 GGSRGGRGGFG-GRGGFGGRGGFGGGRGRGRGGARSG 482
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 274
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 287
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 300
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 313
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPAXXXXPP 859
PPPP PPP P PPPP P PP+ PP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 339
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 9/43 (20%)
Frame = +2
Query: 725 PPPP---------PPPXXXXXPXPSXPPPPXXXAPXXXPXRPP 826
PPPP PPP P PPPP P PP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = +2
Query: 728 PPPPPPXXXXXPXPSXPPPPXXXAPXXX-PXRPPLP 832
PP P P P PP P P P PPLP
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 734 PPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPP 838
P P P P+ PP P P +PP PPP
Sbjct: 155 PSIPGFGNLPNPAMPPIPFL--PFNPAAQPPFPPP 187
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +2
Query: 707 LXXXFXPPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPP 835
L + PPPPPPP + P P +PP
Sbjct: 183 LPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 731 PPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
PP P P+ PPPP P LP P+
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPS 260
Score = 25.8 bits (54), Expect = 9.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 817 PPPPSSPRXPXXPP 858
PPPP++P P PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLPPPA 841
PPPP P + P A P PP P PA
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPA 404
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +2
Query: 617 PPPPXKXKKSXXGXX-AXXFSXXXXXXXXXXLXXXFXPPPPPPP 745
PPPP K S + + F PPPPPPP
Sbjct: 909 PPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 725 PPPPPPPXXXXXPXPSXPPP 784
PPPPPPP + P P
Sbjct: 308 PPPPPPPSNDFWKDSNEPAP 327
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPPPXXXXXPXPSXPPPPXXXAPXXXPXRPPLP 832
P PP P PPP P PP P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 719 FXPPPPPPPXXXXXPXPSXPP 781
+ PPPPPPP P P
Sbjct: 368 YSPPPPPPPPELLNHSPKSRP 388
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,675,743
Number of Sequences: 5004
Number of extensions: 25961
Number of successful extensions: 643
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 531251476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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