Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J08
(861 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 30 2.3
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 30 2.3
At1g33470.2 68414.m04143 RNA recognition motif (RRM)-containing ... 29 3.0
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb... 29 4.0
At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.3
At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.3
At4g37320.1 68417.m05285 cytochrome P450 family protein 29 5.3
At1g71220.1 68414.m08219 UDP-glucose:glycoprotein glucosyltransf... 29 5.3
At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 7.0
At1g33470.1 68414.m04142 RNA recognition motif (RRM)-containing ... 28 7.0
At1g06270.1 68414.m00663 pentatricopeptide (PPR) repeat-containi... 28 7.0
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ... 28 9.2
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 TLKSEVAKPDRTIK-IPGVSPWKLPRALSCSDPGRLPDTCPPFSPSGSVAPFS*PHA 682
TL+++V + T+K + G++P L R+ ++ R+P T S S+ P PH+
Sbjct: 290 TLRAKVKMAEETVKRVTGMNPMLLGRSSGHNNNNRMPITGNNRMDSSSIIPAYQPHS 346
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 TLKSEVAKPDRTIK-IPGVSPWKLPRALSCSDPGRLPDTCPPFSPSGSVAPFS*PHA 682
TL+++V + T+K + G++P L R+ ++ R+P T S S+ P PH+
Sbjct: 284 TLRAKVKMAEETVKRVTGMNPMLLGRSSGHNNNNRMPITGNNRMDSSSIIPAYQPHS 340
>At1g33470.2 68414.m04143 RNA recognition motif (RRM)-containing
protein similar to RRM-containing protein SEB-4 [Xenopus
laevis] GI:8895698; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 244
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -1
Query: 537 FATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPLILWITVLPPLS 358
F S S+D+ YG A P YGS P G+ + YP + + P++
Sbjct: 138 FGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGPMTGVAAAPAAGFYPYLQFAEGNGPVT 197
Query: 357 ELIPL 343
PL
Sbjct: 198 GYAPL 202
>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
(RbohA) / NADPH oxidase identical to respiratory burst
oxidase protein A from Arabidopsis thaliana [gi:3242781]
Length = 902
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 486 RPPDEHHKNRRSSQRW 533
RPPDEH NR S+ W
Sbjct: 667 RPPDEHRLNRADSKHW 682
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 295 PLPRSLTRCARSFGCGERYQLTQRR 369
P PRS RCA S GC R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 295 PLPRSLTRCARSFGCGERYQLTQRR 369
P PRS RCA S GC R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221
>At4g37320.1 68417.m05285 cytochrome P450 family protein
Length = 495
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -2
Query: 665 KAPRFPKGRKADRYPVSGQGRNRRAHEGASRGKRLVSL 552
K RF K +A + G GR RA GA GKRLVSL
Sbjct: 411 KPERFEKEGEARKLMPFGMGR--RACPGAELGKRLVSL 446
>At1g71220.1 68414.m08219 UDP-glucose:glycoprotein
glucosyltransferase, putative similar to
UDP-glucose:glycoprotein glucosyltransferase precursor
GB:Q09332 [SP|Q09332] from Drosophila melanogaster,
[gi:7670746] and [gi:11346464] from Homo sapiens
Length = 1673
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 645 GEKGGQVSGKRPGSEQESARGSFQGETPGIFIVLSG 538
G GG+ + G ++E +G QG+T IF + SG
Sbjct: 1316 GFVGGRQQSMKGGPDKEHEKGGRQGKTINIFSIASG 1351
>At3g20830.1 68416.m02634 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 408
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 286 PIRKPPLPARWPIH*CRKNLPHL 218
P PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406
>At1g33470.1 68414.m04142 RNA recognition motif (RRM)-containing
protein similar to RRM-containing protein SEB-4 [Xenopus
laevis] GI:8895698; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 245
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = -1
Query: 537 FATSDLSVDFCDARQGG-GAYGKTPATRPFYGSWPFAGLLLTCSFLRYPLILWITVLPPL 361
F S S+D+ Q YG A P YGS P G+ + YP + + P+
Sbjct: 138 FGFSSYSMDYNYPTQSYYNVYGGATAQHPMYGSGPMTGVAAAPAAGFYPYLQFAEGNGPV 197
Query: 360 SELIPL 343
+ PL
Sbjct: 198 TGYAPL 203
>At1g06270.1 68414.m00663 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 343
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 689 ISVSVLXRSLQAGCVPNP 742
+S ++L R+L++GC+PNP
Sbjct: 118 LSFAILQRTLRSGCLPNP 135
>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
(FLA8)
Length = 420
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +2
Query: 509 KSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPG----RLPDTCPPFSPSGSVAPFS*P 676
KS S P+ + P SP P + S P P++ P SP+GS S
Sbjct: 334 KSKSPSPAPAPE-PVTAPTPSPADAPSPTAASPPAPPTDESPESAPSDSPTGSANSKSAN 392
Query: 677 HAVGISVSVLXRSL 718
AVG+S L +L
Sbjct: 393 AAVGVSTPSLFTAL 406
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,274,589
Number of Sequences: 28952
Number of extensions: 334105
Number of successful extensions: 991
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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