Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J07
(837 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone oxidoredu... 66 1e-10
CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein. 66 1e-10
CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein. 66 1e-10
BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase (ubi... 66 1e-10
BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase (ubi... 66 1e-10
BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase (ubi... 66 1e-10
AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone oxidore... 66 1e-10
CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein. 66 2e-10
BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase (ubi... 66 2e-10
AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone oxidore... 66 2e-10
>U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 YVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYSKEESP 396
+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYSK +
Sbjct: 19 FVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKE 77
Query: 397 APKY 408
P +
Sbjct: 78 RPDF 81
>CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein.
Length = 87
Score = 65.7 bits (153), Expect = 2e-10
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 IGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 408
+G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K + P +
Sbjct: 29 LGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
>BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4-like 2 protein.
Length = 87
Score = 65.7 bits (153), Expect = 2e-10
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 IGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 408
+G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K + P +
Sbjct: 29 LGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
>AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit homolog protein.
Length = 87
Score = 65.7 bits (153), Expect = 2e-10
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 IGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 408
+G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K + P +
Sbjct: 29 LGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,784,618
Number of Sequences: 237096
Number of extensions: 1801367
Number of successful extensions: 4560
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4510
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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