Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J06
         (836 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.052
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.7  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 728 PXPXXXXXXXXXXXPPPPPPP 790
           P P           PPPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 24.6 bits (51), Expect(2) = 0.052
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 765 SXPPPPPPXP 794
           S PPPPPP P
Sbjct: 782 SPPPPPPPPP 791



 Score = 24.6 bits (51), Expect(2) = 0.052
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 771 PPPPPPXPXXXXXPXXPXKKT 833
           PPPPPP P     P    + T
Sbjct: 783 PPPPPPPPPSSLSPGGVPRPT 803


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
           GGGGGGG             G    GG  GG
Sbjct: 226 GGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256



 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -3

Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXG 700
           GGGG GG           G G    GG  G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 770 PPPPPPP 790
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = -3

Query: 786 GGGGGGXXXXXXXXXXXGXGXXXXGGXXG 700
           GGGGGG           G G    GG  G
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -3

Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXG 700
           GGGGGGG           G      GG  G
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,473
Number of Sequences: 2352
Number of extensions: 7291
Number of successful extensions: 249
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)