Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J06
(836 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri... 76 3e-14
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila... 69 3e-12
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi... 69 3e-12
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 69 3e-12
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila... 69 3e-12
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C) 67 1e-11
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 33 0.18
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.18
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 33 0.18
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 33 0.18
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.18
At1g61080.1 68414.m06877 proline-rich family protein 30 0.41
At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 26 0.72
At4g18570.1 68417.m02749 proline-rich family protein common fami... 31 1.3
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 31 1.3
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 31 1.3
At4g14750.1 68417.m02270 calmodulin-binding family protein conta... 25 1.6
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 30 1.7
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 30 1.7
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 25 1.7
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 25 2.0
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 24 2.8
At5g02600.2 68418.m00195 heavy-metal-associated domain-containin... 29 2.9
At5g02600.1 68418.m00196 heavy-metal-associated domain-containin... 29 2.9
At3g50130.1 68416.m05480 expressed protein ; expression supporte... 26 3.4
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 29 3.8
At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family... 26 3.9
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 5.1
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 5.1
At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 28 6.7
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 28 6.7
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.7
At4g30460.1 68417.m04325 glycine-rich protein 28 6.7
At2g30560.1 68415.m03722 glycine-rich protein 28 6.7
At1g75550.1 68414.m08780 glycine-rich protein 28 6.7
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 28 8.8
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 28 8.8
At1g68390.1 68414.m07813 expressed protein contains Pfam profile... 25 9.9
>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
ribosomal protein S2 - Arabidopsis thaliana,
SWISSPROT:RS2_ARATH
Length = 276
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++++WVPVTKLGRLV+EGKI K+E IYL SLP+KE++IID +G SL +
Sbjct: 41 EEEKWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLK--DEVMKIMPVQ 98
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 99 KQTRAGQRTRFKA-FIVVGDSNGHVG 123
>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
to ribosomal protein S2 GI:430711 from [Drosophila
melanogaster]
Length = 284
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++ +WVPVTKLGRLV + KI KLE IYL SLP+KE++IID +G +L +
Sbjct: 49 EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLK--DEVMKIMPVQ 106
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 107 KQTRAGQRTRFKA-FVVVGDGNGHVG 131
>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
to ribosomal protein S2 GI:939717 from [Urechis caupo]
Length = 284
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++ +WVPVTKLGRLV + KI KLE IYL SLP+KE++IID +G +L +
Sbjct: 49 EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLK--DEVMKIMPVQ 106
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 107 KQTRAGQRTRFKA-FVVVGDGNGHVG 131
>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative
Length = 284
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++ +WVPVTKLGRLV + KI KLE IYL SLP+KE++IID +G +L +
Sbjct: 49 EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLK--DEVMKIMPVQ 106
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 107 KQTRAGQRTRFKA-FVVVGDGNGHVG 131
>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
to ribosomal protein S2 GI:939717 from (Urechis caupo)
Length = 284
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++ +WVPVTKLGRLV + KI KLE IYL SLP+KE++IID +G +L +
Sbjct: 49 EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLK--DEVMKIMPVQ 106
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 107 KQTRAGQRTRFKA-FVVVGDGNGHVG 131
>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
Length = 285
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 228 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGSSLX**RXLKNHALXX 407
++++WVPVTKLGRLV G I ++E IYL SLP+KE++IID +G +L +
Sbjct: 50 EEEKWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLK--DEVMKIMPVQ 107
Query: 408 KKXXXGKGQRFQGXFLPLGXXXGXIG 485
K+ G+ RF+ F+ +G G +G
Sbjct: 108 KQTRAGQRTRFKA-FVVVGDGNGHVG 132
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 534 PPPPPPVHSPPPPVHSPPPPPVYSPPPPPPP 564
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 533 PPPPPPPVHSPPPPVHSPPPPPVYSPPPPPP 563
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 428 PPSPPPPVYSPPPPPPPPPPVYSPPPPPPPP 458
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPPPPPPP 503
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 427 PPPSPPPPVYSPPPPPPPPPPVYSPPPPPPP 457
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
P PP P P PPPPPPP
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPPPPP 459
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 441 PPPPPPPVYSPPPPPPPPPPPPVYSPPPPPP 471
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 446 PPVYSPPPPPPPPPPPPVYSPPPPPPPPPPP 476
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 472 PPPPPPPVYSPPPPSPPPPPPPVYSPPPPPP 502
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 477 PPVYSPPPPSPPPPPPPVYSPPPPPPPPPPP 507
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPP 473
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
P PP P P PPPPPPP
Sbjct: 447 PVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
P PP P P PPPPPPP
Sbjct: 478 PVYSPPPPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 710 PPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P PPPPPPP
Sbjct: 420 PPTLTSPPPPSPPPPVYSPPPPPPPPP 446
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 451 PPPPPP---PPPPPPVYSPPPPPPPPPPPPP 478
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 710 PPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P PPPPPPP
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPP 493
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPP 784
PP PP P P PPPPP
Sbjct: 488 PPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPPPP 406
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPP 787
PP PP P P PPPPPP
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYPSPPPPPP 418
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
P PP P P PPPPPPP
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 407
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P P PPPPP
Sbjct: 387 PPPPPPPPPPPPPPPPPPPPPYVYPSPPPPP 417
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 388 PPPPPPPPPPPPPPPPPPPPYVYPSPPPPPP 418
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPP P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSP 420
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPP PP
Sbjct: 391 PPPPPPPPPPPPPPPPPYVYPSPPPPPPSPP 421
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPP PPP
Sbjct: 392 PPPPPPPPPPPPPPPPYVYPSPPPPPPSPPP 422
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 401 PPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 22 PPPPPPSLPPPVPPPPPSHQPYSYPPPPPPP 52
Score = 24.6 bits (51), Expect(2) = 3.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 44 SYPPPPPPPP 53
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXP 821
PPPPPP P P
Sbjct: 73 PPPPPPSAPPPLVPDPP 89
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 595 PPPRPPPPPPPPPSSRSIPSPSAPPPPPPPP 625
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 576 PPPPPPLPSRSIPPPLAQPPPPRPPPPPPPP 606
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 596 PPRPPPPPPPPPSSRSIPSPSAPPPPPPPPP 626
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 594 PPPPRPPPPPPPPPSSRSIPSPSAPPPPPPP 624
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 710 PPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P PPPPPPP
Sbjct: 639 PPPPPPPPPPTRIPAAKCAPPPPPPPP 665
Score = 26.6 bits (56), Expect(2) = 0.31
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXPXKKT 833
PPPPPP P P KT
Sbjct: 716 PPPPPPLSKTPAPPPPPLSKT 736
Score = 25.0 bits (52), Expect(2) = 9.0
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPP 781
PP PP P P PPPP
Sbjct: 716 PPPPPPLSKTPAPPPPPLSKTPVPPPPP 743
Score = 24.6 bits (51), Expect(2) = 0.31
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 678 STPPPPPPPP 687
Score = 21.0 bits (42), Expect(2) = 9.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 773 PPPPPP 790
PPPPPP
Sbjct: 764 PPPPPP 769
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 513 PPPLPTTIAAPPPPPPPPRAAVAPPPPPPPP 543
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPPPPPPP 555
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 538 PPPPPPGTAAAPPPPPPPPGTQAAPPPPPPP 568
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 526 PPPPPRAAVAPPPPPPPPGTAAAPPPPPPPP 556
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P P PPPPPPP
Sbjct: 539 PPPPPGTAAAPPPPPPPPGTQAAPPPPPPPP 569
Score = 26.2 bits (55), Expect(2) = 0.41
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXP 821
PPPPPP P P P
Sbjct: 549 PPPPPPPPGTQAAPPPP 565
Score = 24.6 bits (51), Expect(2) = 0.41
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 506 SAPPPPPPPP 515
>At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 473
Score = 25.8 bits (54), Expect(2) = 0.72
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 713 PXXXXPXPXXXXXXXXXXXPPPPPPP 790
P P P PPPPPPP
Sbjct: 265 PRKSNPIPNLASEFHPSPPPPPPPPP 290
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 281 SPPPPPPPPP 290
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXPXK 827
PPPPPP P P K
Sbjct: 330 PPPPPPPPPVEYYKSPPTK 348
Score = 24.2 bits (50), Expect(2) = 0.72
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 770 PPPPPPPXXXXXXXXXXPXK 829
PPPPPPP P K
Sbjct: 329 PPPPPPPPPPVEYYKSPPTK 348
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPP 787
PP PP P P PPPPPP
Sbjct: 314 PPPPPPLLQQPPPPPSVSKAPPPPPPPPPP 343
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 312 PPPPPPPPLLQQPPPPPSVSKAPPPPPPPPP 342
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 313 PPPPPPPLLQQPPPPPSVSKAPPPPPPPPPP 343
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPP 787
PP PP P P PPPPPP
Sbjct: 385 PPPPPPSAAAPPPPPPPKKGPAAPPPPPPP 414
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPPPPPP 414
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPP 787
PP PP P P PPPPPP
Sbjct: 51 PPPPPPPPPPPPPPAVNMSVETGIPPPPPP 80
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPP
Sbjct: 50 PPPPPPPPPPPPPPPAVNMSVETGIPPPPPP 80
>At4g14750.1 68417.m02270 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 387
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 66 SPPPPPPPPP 75
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 771 PPPPPPXPXXXXXP 812
PPPPPP P P
Sbjct: 69 PPPPPPPPPPLQQP 82
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P PPPPPPP
Sbjct: 707 PPPPPPAPPAPPTPIVHTSSPPPPPPPPPPP 737
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 771 PPPPPPXP 794
PPPPPP P
Sbjct: 690 PPPPPPPP 697
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 774 PPPPPXPXXXXXPXXP 821
PPPPP P P P
Sbjct: 727 PPPPPPPPPPPAPPTP 742
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PP PPPP
Sbjct: 62 PPPPPPPPCPPPPSPPPCPPPPSPPPSPPPP 92
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 119 SPPPPPPPPP 128
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 150 SPPPPPPPPP 159
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 771 PPPPPPXPXXXXXP 812
PPPPPP P P
Sbjct: 153 PPPPPPPPPPTITP 166
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 771 PPPPPPXPXXXXXP 812
PPPPPP P P
Sbjct: 154 PPPPPPPPPTITPP 167
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 384 SPPPPPPPPP 393
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXPXKK 830
PPPPPP P P ++
Sbjct: 423 PPPPPPPRYTQFDPQTPPRR 442
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPP 787
PP P P P PPPPP
Sbjct: 169 PPPPPTITRSPPPPRPQAAAYYKKTPPPPP 198
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 770 PPPPPPP 790
PPPPPPP
Sbjct: 206 PPPPPPP 212
>At5g02600.2 68418.m00195 heavy-metal-associated domain-containing
protein low similarity to gi:3168840 copper homeostasis
factor; contains Pfam heavy-metal-associated domain
PF00403; predicted proteins, Arabidopsis thaliana
Length = 319
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 765 SXPPPPPPXPXXXXXPXXPXKKT 833
S PPPPPP P P P K +
Sbjct: 224 SPPPPPPPSPPQSSPPSPPEKNS 246
>At5g02600.1 68418.m00196 heavy-metal-associated domain-containing
protein low similarity to gi:3168840 copper homeostasis
factor; contains Pfam heavy-metal-associated domain
PF00403; predicted proteins, Arabidopsis thaliana
Length = 319
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 765 SXPPPPPPXPXXXXXPXXPXKKT 833
S PPPPPP P P P K +
Sbjct: 224 SPPPPPPPSPPQSSPPSPPEKNS 246
>At3g50130.1 68416.m05480 expressed protein ; expression supported
by MPSS
Length = 564
Score = 26.2 bits (55), Expect(2) = 3.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXP 821
PPPPPP P P P
Sbjct: 10 PPPPPPPPSFRSIPRPP 26
Score = 21.4 bits (43), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPP P
Sbjct: 6 SFTPPPPPPP 15
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 81 PP--PPLPRLPPPLLPPPEEPPREPPPPPPP 109
>At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPXPXXXXXPXXP 821
PPPPPP P P P
Sbjct: 39 PPPPPPPPLSLSPPPSP 55
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPP P
Sbjct: 35 SITPPPPPPP 44
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 1101 PPLPPPPSQPPPP---PLSPPPSPPPPPPPP 1128
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 710 PPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP P P PPPPPPP
Sbjct: 64 PPPPSPPPPKKSSCPPSPLPPPPPPPP 90
>At5g19090.2 68418.m02270 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 465
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 105 GGGGGGGGPANNNKGQKIGGGGGGGGGGGGG 135
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 106 GGGGGGGPANNNKGQKIGGGGGGGGGGGGGG 136
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 105 GGGGGGGGPANNNKGQKIGGGGGGGGGGGGG 135
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 106 GGGGGGGPANNNKGQKIGGGGGGGGGGGGGG 136
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +2
Query: 698 PPXXPPXXXX--PXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 31 PPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPPP 63
>At4g30460.1 68417.m04325 glycine-rich protein
Length = 162
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 126 GGGGGGGGGRGGGGGSGNGEGYGEGGGYGGG 156
>At2g30560.1 68415.m03722 glycine-rich protein
Length = 171
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 107 GGGGGGGKNGGGCGGGGGGKGGKSGGGSGGG 137
>At1g75550.1 68414.m08780 glycine-rich protein
Length = 167
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 71 GGGGGGGGGGGGGGGGGGGGGGWGWGGGGGG 101
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 789 GGGGGGGXXXXXXXXXXXGXGXXXXGGXXGG 697
GGGGGGG G G GG GG
Sbjct: 72 GGGGGGGGGGGGGGGGGGGGGWGWGGGGGGG 102
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPPXXXXXXXXXXPXKN 832
PP PP P P PPPPP P K+
Sbjct: 45 PPISPPPPPPPPPPQSHAAAYKRYSPPPPPSKYGRVYPPPPPGKS 89
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 698 PPXXPPXXXXPXPXXXXXXXXXXXPPPPPPP 790
PP PP P P PPPPPPP
Sbjct: 680 PPPPPPPGGGPPPPPGGGP-----PPPPPPP 705
>At1g68390.1 68414.m07813 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function,
DUF266; expression supported by MPSS
Length = 408
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 765 SXPPPPPPXP 794
S PPPPPP P
Sbjct: 81 SPPPPPPPSP 90
Score = 21.4 bits (43), Expect(2) = 9.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 774 PPPPPXPXXXXXP 812
PPPPP P P
Sbjct: 82 PPPPPPPSPPSEP 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,127,967
Number of Sequences: 28952
Number of extensions: 201955
Number of successful extensions: 4842
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2913
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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